Cyprinus carpio (common carp): 109073778
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Entry
109073778 CDS
T05134
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04080
Neuroactive ligand-receptor interaction
ccar04082
Neuroactive ligand signaling
ccar04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109073778
04082 Neuroactive ligand signaling
109073778
04519 Cadherin signaling
109073778
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109073778
Ion channels [BR:
ccar04040
]
Ligand-gated channels
GABA-A
109073778
SSDB
Ortholog
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
109073778
NCBI-ProteinID:
XP_042594601
Ensembl:
ENSCCRG00000044525
LinkDB
All DBs
Position
B14
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AA seq
452 aa
AA seq
DB search
MSHKVVLGKQKINSENITRILDGLLEGYDNRLRPGSGVSVTEVKTDIFVTSFGPVSDVKM
EFTMDMFFRQMWVDERLAFQGPVEILPLNNRMVDKIWTPDTFFFRNARKSLAHNMTSPNK
LFRIMQNGTVFYTMRLTVSAVCPMVMMDFPMDGHTCPLLFGSCKIRLSVCFPSILPSTIL
HLLSLTPSDAYTNREIVYTWRKGLQASVDFPPESSSLLQYDLVGQTLFSETYKFSTGLYS
VQVVHFYLQRKLGYHLIQTYIPLIMVVVLSQVAFWINKESVPARTVAGITTVLTMTTLSI
SARSSLPKVSYATAMDWFIAVCFAFVASALVEFAAVNYFATLEANRENRRLSRASVLESI
AQGSDDEPETSQSETSGFSRRRRANSVSEAPGNRYPIFLQGSAVPPNMMLAGTSAIDKYS
RVLFPLAFGIFNLIYWFIYLSKDTMEKPREIE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacaaggtcgtattaggaaagcaaaagataaattcagaaaatataacacggatt
ctagacggacttcttgagggttatgacaatcgactacgcccgggatctggagtctctgta
actgaggtcaaaacagacatatttgttacaagttttggaccagtatctgatgttaagatg
gagttcactatggatatgtttttccgccaaatgtgggttgacgagaggttagcctttcag
gggcccgtcgaaatcttgcctttgaacaaccgcatggtggacaagatctggacgcccgac
acgtttttttttcgcaacgcgaggaagtccctcgcacacaacatgacgtctcctaacaag
ctgtttcggatcatgcaaaacggaacggtcttttacaccatgaggttgactgtaagtgca
gtgtgtccaatggtgatgatggactttcctatggatggacacacatgtcctctcctgttt
ggaagctgtaagatccgtctttcagtctgttttccatccatccttccatccaccattctt
cacctgctttctcttacaccttcagatgcgtacactaatcgtgaaatcgtctacacgtgg
aggaagggtcttcaagcatctgtagatttccctccagagtcatccagcttacttcagtat
gatcttgtgggccagaccttgttcagcgagacatataaattcagcacaggtctgtattct
gtccaggttgtccatttctatcttcagaggaagctcggctaccatctcatccaaacgtac
atcccgttgattatggtggttgtgctgtcacaagtggcattctggatcaacaaggagtct
gtcccggctcgaacagtggctggaatcaccactgtgctcaccatgaccactctgagcatc
agcgcccgctcctcgctgcccaaagtctcctacgccaccgccatggactggttcatcgcc
gtctgctttgccttcgtggcctcggccctcgtggagttcgctgcggtcaactactttgcc
acgctcgaggccaacagggaaaaccgccggctctccagggcctccgttctggagtccata
gcccagggcagcgacgacgagccggagacgtcacagtctgagaccagtggctttagccgc
agaagacgggcgaactctgtgtccgaggctcccgggaatcgctatcccatcttccttcag
ggctcggccgtcccacccaacatgatgctggcaggcaccagtgccatagacaaatactcc
cgcgtcctcttccctctggccttcgggatcttcaacctcatctactggttcatctacctc
agcaaggacaccatggaaaagcccagggagatcgagtga
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