KEGG   Cyprinus carpio (common carp): 109074095
Entry
109074095         CDS       T05134                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109074095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccar03019]
    109074095
   03041 Spliceosome [BR:ccar03041]
    109074095
Messenger RNA biogenesis [BR:ccar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109074095
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109074095
Spliceosome [BR:ccar03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109074095
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 DNA_ligase_IV NID
Other DBs
NCBI-GeneID: 109074095
NCBI-ProteinID: XP_042621815
UniProt: A0A8C1ZQL7
LinkDB
Position
A11:complement(3084137..3090309)
AA seq 363 aa
MSKEQQTPREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGF
VTYSSVNEVDAAMDARPHKVDGRAVEPKRAVSREDSSRPGAHSTVKKMFVGGIKEDTDEE
HLREYFSQFGKIEEVNIMTEKNSDKRRGFAFITFDDHDAVDRIVIQKYHTVNGHNCEVRK
ALSREEMNRVSVNQRGGRGGGGGGGGGSGGGGGGNFGRGGGYGGGYGGGRGGYGGGDGYN
GYGGNGGYGGGGPNYGGNRGYGGGGGGGGGYGNQGGGYGGGGGGYDNYNNGGGGNFGGGN
FGGGGGYNDFGNYNNQSSSNYGPMKGGNYGGGGRSGGGGGPYGGGYGGGSGGGYGGGSGG
RRF
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgtccaaagagcaacagaccccacgtgagcctgagcagctccgaaaactcttcatcggg
ggcctcagtttcgagacaacagatgagagtctaagggcccacttcgagcaatggggaact
cttacagactgtgtggtgatgagggaccccaacacaaagaggtcgaggggttttgggttt
gtgacctatagttcggtaaatgaggtggatgcagcgatggatgctcgtccgcacaaagtg
gacggaagagctgttgagcccaagagggcggtgtctagagaagactcgtccagaccaggc
gctcactccactgttaaaaagatgtttgtgggcggaatcaaagaagacacggatgaggaa
catctgcgcgagtatttcagccagtttggtaaaattgaggaggtgaacatcatgactgag
aagaacagtgataagaggaggggcttcgccttcataacatttgatgaccatgatgctgtt
gacaggattgtcatacagaaataccacacagtgaatggacacaactgtgaagtcaggaaa
gctctctccagagaggaaatgaaccgggtgtcggttaatcagcgaggcgggcgaggagga
ggaggaggaggtggtggtggtagtggtggcggcggcggtggaaactttggcagaggtgga
ggatatggaggtggatatggaggaggaagaggtggttacggtggaggtgatggatataat
ggctacggagggaatggtggttatggtggaggtggacctaattatggaggcaaccgtggt
tatggaggcggcggcggaggtggtggtggctatggaaaccagggtggaggctacggcggt
ggcggcggtggctatgataactacaacaatggtggtggaggcaactttggaggaggcaac
tttggaggtggcggaggctacaacgactttggcaactacaacaatcaatcttcctctaac
tacggcccaatgaagggaggaaactacggaggtggtggaaggagcggtggtggcggtggc
ccatatggcggtggttatggaggaggctctggtggtggttatggaggaggctctggtggg
cggaggttttag

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