Cyprinus carpio (common carp): 109074430
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Entry
109074430 CDS
T05134
Symbol
jmjd1ca
Name
(RefSeq) LOW QUALITY PROTEIN: probable JmjC domain-containing histone demethylation protein 2C
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109074430 (jmjd1ca)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
109074430 (jmjd1ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
FYVE
zf-UDP
Motif
Other DBs
NCBI-GeneID:
109074430
NCBI-ProteinID:
XP_042598710
UniProt:
A0A9Q9XBD9
LinkDB
All DBs
Position
B17:21339208..21406791
Genome browser
AA seq
2605 aa
AA seq
DB search
MAVELVGKRCLCVSGGERLELAGISRWSWRAGVIRACDSPALTVCMHWDGEQSAERKWRR
LREECEVVLLEQELVWAYKRTGTNSSSSSQEKRRLQPALRFRPLIGQSSIGGWTVVEFIS
DRQLEFYTEQEELQPFEDEVDGGNPAVRDDPSLQEQVQAWLKQNQFQNILQQGACSLKGL
RVKVFRLESKAQWLSGVITHHDQNNRTVTVITDQVREMNVDPSLVQMMLLDDITHSSLMG
DKSKRKSHITKGTGSISNNTTTNDQVCSSRPGQHQSEMSTQNCSMEEDEKEGMRVEKRSD
EARDTSKSKNSNGERKRRKEDEEKDDKQRNRCGLKRLKAGSVSDLSENSDSENSSCRVQD
SSSDSGSKRQLKQHYTSKRPLDCEVNPSHRGGEPSANQLGDSKTQNMGKTSPSDSPSASC
NGAFRNTDAPESGALVSGGKSEEKGDGGMTEIEDRSEGASREDSEAVSALLASQESEQLV
SMEATCVLLHASPLECEGAEAEHEMSTNDPEVKGSEFTHAEPRGSEFNQSEVRRSEFPHS
EASSDNAVPVEEEPRGLPPCSPVIPCNKEEDVDSKQSCSPATVNAEYGPVTSLDATHKPS
VHTSPCSSPEIISKPQTVRETSRQKQSASLEIGLLKNAAPLAKSMDRTLSCLKMSSNPKM
TCSTTPVLIQTPSPTPNRSRTPTHSPSRMPNRTPTPDKSTRSPLIVDRKEPFTIYRDPAL
FRTELEAHPTYIQPPHTPPNPKHHLKTPSPSSSSPSLTPASSHSKLLSPSPHPAHLSPIP
LHSQPPLCSLSTPHSTIPHPHLLPSLLPPALLSGHPRIGALGLPHHPFALPGNPSLLGQT
SGAAPLAPLGLYPLLWPPFPNGAHSYPGLGLQASKWTHPDGAGISDSSVRSNTPSPWISQ
PTAVTNADGQGLQPPLPIRPSSADPQRVSRNTQHCTPSSKTTEELDRRAVTESTLIHTHL
KSEQERLHTAASKNGQTYCPVALESSPRRTKQPLVVYDLTGERPNRYQEENRRILQESSE
VAPFTAKLGSDREPRYPRNPTSAKEREREMDRDREGERERDVHAFRHILPPRPRSAHPTP
TLTSSSYFASLSNSVENKPPQRRVPASKELYERLSASNTPLLTSSSSQVSMRARPPPLVK
RHHEKEEGLLGKISEQLAHKASSMEAVEVAAVERRGPGSSLISSSPRNVPLLHRAPIFHP
PAPTIVVSKDSGHGKLSPPTLTPIQPMSLPGIAQKQQRPPTLLPELKHVALDGKRLVPEK
ATMPLQAYDTQWGGVMYGREKVGGGHTTNGGVVKPQSATASVIVRPTNHTHTTISYTVSD
SSVSQMQSGYIRPLESMSNPHSKESGVQHKRGVLWTPLDTVHPINMTAQKGDLSAPINMT
TKPINTAQPLTNMNVPRSRIDLIAEHCKRRETGAVQPKMESSTTSCCTSRDFPHLKKHRA
GLAIAESRHNTHIIQPQHTIHPSNAMKHTSHLSNSRCGSCTTLTTHPVCSAHASGREKEP
VFNTSSSECVQLASGTSSPVPTPKQGLLTNELAPASAVTNQSQSGQNNYHKLKKAWLTRH
SEQDRGSTVSQSVDGTKTAVTLTSTSISVPIKQKVNGLVDNGFSQEDKDPSLDSRKSKIL
NKKTQENRKSGLEDRKSASNALSFNSEDKKSVMADEKPVTVGKKSSLEEVKPVLDRNGKL
EGKEPFVEDKKSFEKRSTLVHMKPEREKRGEKRPLESSGDTERVEDTPKKKERVVXQKRF
KKHTKTPLKKKKNDLNKKKKVEEEEEEEEEKAKPNGTLQSAKDKHQQRLANSNGIPRSVL
KDWRKVRKLKQTGEAFLQDDSCAEIGPNVQKCRECRLDRSRKSQEPAISPVFCRFYYFRR
LSYSKNGVIRVNGFSVSEQTDEEAVTVWTGSSKDEEDKKMRKMDLETSKSILALIGDQFC
QLIKTEDTAFTWVKKDTQIMWKRAVRGVREMCDACEATLFNMHWACHKCGFVVCMDCYKA
REKKKAKDKELYVWVRCVKNQPHDFKNLMPTQIVPETALTDMQRSLHSVREKFGIPSHCS
CTDSKTHNPSTATTNGLSPLSDTDQSDLKSRQIPDQQKNSHVTVKAHTEKREKARCDGIE
AHSRKSTSPEQGSTLRDLLTSTAGKLRLGATGGAFAPVYNLSEQVAQKTRVPNILDDIIA
SVVENKIPATKMARVGLNQDSLPEGEAGQRPEGVKLDESLLADHHTIVPHDWLGNHRLLW
LKDHLHQGNQRLFKENWTQEQPVLVSGLHKSLNANLWKPEHFSREFSSLHSDLYNCRDGS
VTNSKVKEFWDGFEDVSKRPKSDKGESVVYRLKDWPSGEEFLALMPARYHDVMKSLPVPE
YTDPEAHLNLASHLPSFFIRPDLGPRLCCAHGVTTCPEQDFGTSNLHVEISDTMSILVYV
GVAKGNGASSKAGVLKLLEGEVLDESVKKRLKDPKETPGALWHIYMSKDLQKIQEFLQKI
TAEQQTEADPEADSDSEWDGDSDLLREGGWYLSPRLRQRLKDEYGIESRTLLQFHGDAVI
IPAGALHQVMNLHSCIQVNVDFVSPEHAHNSYYLTQELRPLKDQMNYEDKLQVKNIFYHS
VKDAVATLRNHLKEKNTDDVKQEES
NT seq
7818 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagctggtggggaagcgctgcctgtgcgtgagcggaggagagcggctggag
ctcgcggggatctcgcgctggagctggagagccggagtcatccgcgcctgcgactcgccc
gcgctaacggtgtgcatgcactgggacggcgagcagagcgcagagaggaagtggaggaga
ctccgagaggaatgtgaggtggttttgttggagcaggaactcgtctgggcctacaaaaga
accggcacaaacagcagcagcagcagccaggagaagagaagactgcaacccgccttgaga
ttccggcctctgattggtcagtcatccataggaggctggacagtggtggagttcatctct
gacagacagctggagttctacacagaacaggaggagctccagccattcgaggatgaagtg
gatggtggaaatccagctgtgagagatgatccgtctctgcaggaacaggtccaggcctgg
ctcaaacaaaaccaattccagaacattcttcagcaaggtgcttgttctctaaagggcctg
agagtgaaagtgttcagactggagtccaaagcccagtggctgtctggagttatcacacat
cacgaccagaacaacagaaccgtaactgtcataactgaccaggttcgggagatgaatgta
gatccgtcgctggttcagatgatgctgctggacgatatcacccactcctcgctgatggga
gacaagtcaaaacgcaaatcacatatcaccaagggcacaggaagcatatcaaacaacact
acaacaaatgaccaggtgtgcagctccaggccagggcagcatcagtctgagatgagcaca
cagaactgcagcatggaagaggatgaaaaggaaggcatgagagttgaaaagaggagtgat
gaggcaagagatacttccaaatcgaaaaacagcaatggtgagagaaaaaggaggaaagaa
gatgaggaaaaagatgacaagcagagaaatagatgtgggttaaagaggttgaaagcaggc
agtgtgtccgacctgtcagagaacagcgattccgaaaattccagctgcagagtgcaggat
tcatcctcggattcaggatcaaagagacagctgaaacagcattacacttcaaagaggcca
ttggactgtgaggttaacccctcccatagaggtggggaaccttcagctaaccaattagga
gatagcaagactcagaatatgggaaaaacttctccatctgattcccctagtgcatcctgc
aatggagcattcaggaacactgatgcaccggagtctggtgctcttgttagtggtgggaaa
tcagaagagaaaggtgatggagggatgacagaaatagaggacaggagtgagggggcatct
cgagaggactcggaggccgtgtctgcgcttttggcgtcccaagagagtgagcagctggtc
tccatggaagccacatgtgtgctgctacacgcatcacctttggagtgtgaaggagcagag
gctgagcacgagatgtcgacgaatgatccagaggtcaaagggtcagagttcacccatgca
gagcctagggggtcagagtttaaccaatcagaggtcaggaggtcagaatttccccattct
gaagccagcagtgacaatgcagtcccagtagaagaggagcctagaggactaccgccttgt
tctccagtaataccttgcaacaaagaggaggatgtagattctaaacagagctgttctcca
gcaactgtgaatgcagaatatggacctgtaacttccttggatgctacccacaagcctagt
gtgcacaccagtccttgctcctctcctgagatcatatctaagcctcagactgtacgggag
acatccagacagaagcagagtgcatctctagagattggcctgttgaagaatgctgctcct
ttggctaaatctatggacagaactcttagctgccttaaaatgtcatccaatcccaaaatg
acctgctccacaactccagtcctgattcagactccctctccaaccccaaaccgatccaga
accccaacacattctccttcccgtatgcctaatcgcactcccactccagacaagtccacc
agaagtcccctcattgtggacaggaaggagcccttcactatctacagagaccccgcacta
ttcaggacggagcttgaggcccaccccacctacattcagccccctcacacacccccaaac
cccaaacaccacctgaagacgccttctccctcctccagctctcccagccttacccctgct
tcctcccatagcaagctactgagtccctcccctcaccctgcacacctttcacctattccc
ctccactcccagcctcccctctgctccctgagcacaccccactcaaccatccctcatccg
cacctcctcccgtccctcctgcctcctgcactcttgtctggacatcctcgtatcggagct
ctgggacttccccatcatccttttgctcttccaggtaacccatctcttctgggccagacc
tctggtgcagctcctctggcacctcttggtctctatcccctcctgtggcctcctttcccc
aacggagcccatagctaccctggactgggtctgcaagcatccaaatggacacacccagat
ggtgctggcatctctgacagcagcgtgaggagtaacaccccaagcccttggatttctcag
cccaccgctgttactaatgcagacggtcaagggttgcaaccccctctgcccatccgaccc
tccagtgcagaccctcagagagtgtctaggaacactcaacattgcacaccctcctccaaa
accacagaagagctggatagaagagctgtcactgagagcacactcatccacactcacctc
aagtctgaacaggagcgtctccacacagcagcaagcaaaaatgggcagacttactgccca
gtcgcccttgaatcctccccaaggcgaaccaaacagccacttgttgtttatgatctcaca
ggagagagacctaaccgctaccaggaagagaaccgccgcattcttcaggaaagcagtgag
gtggcaccattcactgctaaactgggatcagatagggaaccacgataccctagaaacccc
acatctgccaaggagagggagagagagatggacagagacagagaaggagaaagagagaga
gatgtgcatgcattcagacacattttacctccccggccacggtcggcccatcccacccca
accctcacttcgagcagctactttgcctctctgtctaacagtgtggagaacaagcctcca
cagcgcagagtgccagccagcaaagaactctatgagaggctcagtgccagcaacaccccc
ctcttaacttcctccagctcacaggtctcaatgagagccagacctccgcctcttgttaag
cgccaccatgagaaagaagaaggtctgctgggaaagatctcagagcaactggctcataaa
gcatcttccatggaagcagtagaggtagcggctgtggagagaagggggccaggctcttct
ctcatctcctcttctccacgcaatgtgcctttactccaccgtgcgcctatttttcaccct
ccggcaccaaccattgtggtttcaaaagactctggacatggcaaattgtccccgcccact
ctcacacccatccagccaatgagcttgccaggaatagctcagaagcaacagaggccaccc
accttgttgcctgaactcaaacatgtcgccttagatgggaaaagacttgtgccagagaaa
gcaacaatgccgttacaagcctacgatacccaatggggtggagtcatgtatggcagagag
aaagtgggtggtggacacacaacaaatggaggtgtagtcaaaccacagtcagccactgcg
tcagtcattgtacgtccaacaaaccacacacatacaacaataagttacacagtgtctgac
agctcagtttcccagatgcagagtggctacataagaccattggaaagtatgtccaaccca
cactcaaaagagagcggtgttcagcataagagaggtgtcctgtggacccctctggatact
gttcaccccatcaacatgacagcccaaaagggagatctcagtgcacccataaatatgaca
actaaacctattaacacagctcaacccttaacaaatatgaatgttccacgctctaggata
gacctaatcgcagaacactgcaagaggagagagactggtgctgttcaaccgaagatggag
tcctctaccacctcttgttgcacttctagagacttccctcacctgaagaaacacagagct
ggactagctattgctgaatctagacataacacacatataattcagcctcaacacactata
catccttcaaacgctatgaaacatacctctcacctctcaaatagcaggtgtgggtcttgc
actacgctcactacacaccctgtgtgttctgcacatgcatcaggaagagaaaaagagcct
gtattcaacactagttcttctgaatgtgtccaactggcatcagggacttccagccctgtg
ccgacacccaaacaaggtttactaaccaatgagctggcgcctgcttcggccgtaaccaac
caatctcaatctggtcagaacaactaccataaactgaaaaaagcctggctgacccgccat
tctgagcaagacagaggcagcacagtctcccaatcagtagatggcactaagacagctgta
acgttgaccagcacaagcatctctgtgccaatcaaacagaaagttaacggactggtggat
aatgggttcagtcaggaggataaagatccctccctagacagcagaaagtccaaaatattg
aacaagaagactcaagagaacaggaagtctggtttagaggatagaaagtctgctagtaat
gctctaagtttcaattcagaggacaaaaaatccgtcatggccgatgagaaaccagtgaca
gtgggcaagaagtcttccttagaagaggttaaacccgtcttggacagaaatggaaagctc
gagggtaaggagccttttgtagaggacaagaaatcttttgaaaaacgatcaaccctggtt
catatgaagcctgagagggagaaacgaggtgagaaacggccattagagtccagcggtgac
acagagagagtagaagacacccccaaaaaaaaagagagagttgtataacaaaaaagattt
aaaaaacacaccaaaacccctcttaaaaaaaaaaagaatgacctcaataagaagaagaaa
gtagaggaggaggaggaggaagaagaggaaaaggccaaacccaatggaactctgcaaagt
gcaaaggataagcatcaacagagactcgctaacagcaatggcatccctcgctctgtgctg
aaagactggaggaaggtgaggaagctcaagcaaactggagaagcgttcttacaagacgac
tcgtgtgcagagatcgggcccaacgtgcagaagtgcagagagtgtcgcttggatcgctca
cgtaaatctcaggagcctgccatctcacccgtcttctgccgattttactacttccgacgt
ctgtcgtacagtaagaacggcgttatccgtgtgaatgggttttcggtgtctgagcagaca
gatgaggaggcggttacagtgtggacaggaagctcaaaggacgaggaggacaagaagatg
agaaagatggaccttgagacatcaaaatccatcctcgcactcatcggagaccagttttgc
cagctcataaagacagaggacactgctttcacctgggtcaagaaagacactcagatcatg
tggaagcgagcagtgagaggtgtgagggagatgtgtgacgcgtgtgaggccactcttttc
aacatgcactgggcttgtcataaatgtggcttcgtggtttgcatggactgctataaagcc
agagagaagaagaaagccaaagataaagaactgtatgtctgggtccgatgtgtaaagaac
cagccacatgattttaagaacttaatgcctactcagattgtcccagaaacagcattgaca
gacatgcagaggtctttgcactcagtgagagaaaagtttggaatcccatcccattgttcc
tgcactgacagcaaaacccacaaccccagcacagccactaccaacggactctcaccactt
tcagacaccgatcagagtgacttgaagagccggcagatcccagatcaacagaagaactcg
catgtcacagtgaaagcacacactgagaaaagagagaaggcaaggtgtgatggtattgaa
gctcacagtaggaagtccacgagccccgagcaaggatcaacattgcgtgaccttttgacc
tccacagctggaaagttgcgtctcggggccactggaggtgcttttgcaccagtttacaac
ttgtctgaacaggtagcccaaaagactcgcgtgcccaacatcctggatgacatcattgct
tctgtagtagaaaataagattcctgctacaaagatggccagggtggggctgaatcaggat
tcgctgccagaaggggaggcggggcagcggccagagggtgtgaagcttgatgaaagccta
ttggctgatcaccacaccattgtccctcacgattggctaggaaaccaccggctgctttgg
ctcaaagatcaccttcaccaaggcaaccaaagactgttcaaagagaactggacacaagag
cagccagtgctggtgtccggattgcacaagagtttgaatgctaatctgtggaagcctgag
cacttcagccgtgagttctccagccttcatagtgacctctacaattgcagagatgggagc
gtcacaaactccaaggtcaaggagttctgggatggttttgaagatgtgtcaaagagacct
aaatctgataaaggggagtcagtggtgtatagactgaaagactggccatcaggggaggag
tttttggccctcatgcctgccagatatcatgatgtgatgaagtctttgccggtaccagag
tacacagacccagaggcacatctgaacctggcctcacatctgccttccttcttcattcga
cctgaccttggtcctcgcctctgctgcgcccacggtgtaacaacatgtccagaacaagac
ttcgggacaagcaatctacatgttgaaatctcagacaccatgagtattctggtatatgtc
ggggtggccaaaggaaacggagcctcatccaaagcaggggtactaaagctcttggaagga
gaagttctggatgagagtgtaaagaaacgactgaaagaccctaaagagacaccaggtgct
ctgtggcacatctacatgagtaaagacctacaaaagatacaggagtttctacaaaagatc
actgctgagcagcagactgaagcggatccagaggcagactctgactcagagtgggacggt
gattccgacctcctgcgtgaaggcggctggtatctgagccccagactgaggcagaggctt
aaggatgaatatggcatagagagccgcacactcctccagttccatggagatgctgttatc
atccctgctggagctctgcaccaggtgatgaatctacacagttgcatccaagtgaatgtg
gattttgtgtcccctgaacatgcgcacaactcctattatctaacccaagagctccgccct
ctcaaagaccaaatgaactatgaagacaaactccaggtgaagaacatcttttatcactct
gtgaaagatgctgtagccacactgaggaaccatttgaaggagaagaacacagacgatgtg
aaacaggaggagtcctga
DBGET
integrated database retrieval system
