Cyprinus carpio (common carp): 109074487
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Entry
109074487 CDS
T05134
Name
(RefSeq) interferon regulatory factor 3
KO
K09447
interferon regulatory factor 7
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04620
Toll-like receptor signaling pathway
ccar04621
NOD-like receptor signaling pathway
ccar04622
RIG-I-like receptor signaling pathway
ccar04623
Cytosolic DNA-sensing pathway
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
109074487
04621 NOD-like receptor signaling pathway
109074487
04622 RIG-I-like receptor signaling pathway
109074487
04623 Cytosolic DNA-sensing pathway
109074487
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109074487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109074487
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
109074487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
109074487
NCBI-ProteinID:
XP_042571658
Ensembl:
ENSCCRG00000043000
UniProt:
A0A9R1SNU0
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All DBs
Position
A25:16521833..16528564
Genome browser
AA seq
425 aa
AA seq
DB search
MAAMQGSPIGKPQFGPWLIEQVESGKYEGLRMIGNDIFRIPWKHNSRRDLGDDDVKIFKA
WAVVSGKINEHPNDKAKWKTNFRCALYSLKNFEMLEDHSKDPDDQHKVYRIIRPQNHQEI
QNVEPVQLPFIPHLYTAANYMSEEMEQELLNQVETMDLNEQHAESQVWNTCSQQIIPTSS
SNYYETPYSNVSCMTNNTPPPDQQPYTTGQQCNLTTLWDLEISINYRKTEVLKTRLCSPL
IQFHYQCNPSELRGEPIRFPSTEGLIDQKQIQFTKRILDSIQRGLQLEVDQYGIYGFRQD
QCKVFVSTSDPSEIQNPEPRKLHQNTREQLLSFEKYTRDLMDFKENRRGSPDYTIYLCFG
EKLPDGKPLEKKLITVKVVPLICRELHERAQMEGASSLLNENVSLQISHNSLFDLINSLD
LPSVG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgatgcaaggaagtccaattggcaaacctcagtttggcccatggctcatagag
caggtggaaagtgggaaatatgagggattgcgcatgataggaaatgacatattccggatc
ccctggaaacacaactcacgaagagaccttggggacgacgatgtgaaaatatttaaggca
tgggctgtggtcagtgggaagatcaacgagcaccctaacgacaaagccaaatggaagaca
aatttccgttgtgcgctttatagtctaaaaaactttgagatgttagaggatcactccaaa
gatccggacgaccaacacaaagtctatcgcatcatccgtcctcaaaaccaccaagagatc
cagaatgtagagccagttcaacttccattcattcctcatctctacactgcagctaattac
atgtctgaagaaatggagcaggaactgctcaaccaggtggagacaatggatctaaatgaa
caacatgcagaatcccaagtatggaacacctgttcccaacaaatcattccgaccagctca
agcaactactatgagactccctactccaatgtttcatgcatgacgaataacacccctccc
ccggaccagcagccctacaccacagggcagcaatgtaaccttacaactttatgggacttg
gagatctcgatcaactacagaaaaacagaagttttgaaaactcgcctgtgttcgccactc
attcagtttcactaccagtgcaacccatctgagctgagaggagagccaatccgcttccca
tccactgagggtctgattgaccaaaaacagatccagttcactaaacgcatcctggacagc
attcagagaggtctgcagctggaggtggaccagtatggcatctacggcttccgtcaggac
cagtgtaaagtcttcgtcagcaccagcgacccgtctgagatccagaacccagagcccagg
aaactgcaccagaacaccagagagcaactgctcagctttgagaagtacacaagagatctg
atggattttaaagagaacagacggggttctccggattacaccatctacctgtgctttgga
gagaagctcccggatggaaaaccactagagaagaaacttattactgtcaaagttgtacct
ctgatttgccgcgaattgcatgaaagagctcaaatggagggagcgtcctctcttctcaat
gaaaacgttagcttgcagatctcccacaacagcctttttgacctcataaattctttggat
ctgccttcagtaggctaa
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