Cyprinus carpio (common carp): 109074523
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Entry
109074523 CDS
T05134
Name
(RefSeq) neuronal PAS domain-containing protein 1-like
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109074523
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109074523
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
109074523
NCBI-ProteinID:
XP_042626867
UniProt:
A0A8C2A182
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All DBs
Position
A15:complement(9134504..9175812)
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AA seq
770 aa
AA seq
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MAAMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASIIRLTISYLHMRHFASQGDPPWSPLMEGANNCNKMRRTSHSLV
NDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCQTSHESASSSASTSSLAGTPEPAPSSPRSPVSELSERGFF
IRMKSTLTKRGLHIKSSGYKVIHVTGRIRCRPALVPGSSRALHRPMGLVALAHTLPPSTL
NEVRMESHMFVFRVNMDLQVTYCENRISEYMDLSPAEVVGRTCYHFIHAEDLDTIRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSCATVSINHKAPHERNVIWVNYVLSRPELADMPL
DLLQLPESLRAERLQASSSPCDTSPKAQGSTGTQPLKGRPETDHKGKEAFSHTAASQSEN
TRKRLHQSDAESGPPVARRRMEVFRQREDSPCPSSDQASDSEVEEDDERENEWDHNLTSK
RVKREEGPLKQGNGANGAGKIHNGRAVIQHLKSVVTNSGSNIKTEQEVMGTTVGPGSGRH
WSQAQPSSGGTNGSSPPSHPQNSTPTEASSKGLFNPPSPTLSPTIPATSMPRDDRSIHGG
RAPDFELLQRLTASGAAGHVLFHPLALGPQGPQSLYAPSTIRYAPPEMPTAHTEGHRSDH
VAKTPAFFPHLQRIASLPSFNGFSPAEPIFPPPLPFCMNGLRGAAGTDED
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatgccgttcgtcagcgagggaaagtgtgtgagcgtggagtgggacttccta
caggggcttctcgccaaaccacccaccttaccctgcttgcagaacttgaggaaggagaag
tcgcgcaatgctgctcgttctcggcggggtaaggagaactttgagttcttcgagctggcg
aagatgcttccgctccccggggcaattaccagccagctggacaaggcctccatcatccgc
ctcaccatcagttacctgcacatgagacactttgccagtcagggagacccaccctggagc
cctctaatggagggagcgaacaactgcaacaagatgcggagaacaagtcattcactggtc
aatgacatatttgaacagcacctgggagctcatctactacagtctctggatggatttgtg
tttgtggtcagtcaggaaggacgatttctgtatatctcagagactgtgtccatctacctt
ggcctttcacaggttgagttgactggcagtagcgtgttcgattacatccaccctgcggat
catgttgaaatggcggagcgtcttggcattaggccacacctccgggcagaggcaggctgt
caaacgtcccacgagagcgcttcaagctccgcctccacatcctcactggccggcactcca
gaaccagcaccatctagtccccgttctccagtcagtgagttatcagaacgtggcttcttc
atcaggatgaaatccaccctcaccaagcgtggcctccacattaaatcctcgggctataaa
gtgattcatgtgacaggtcggattcggtgtcggccagctctggtgccaggctcctcccgt
gccttgcatcgaccaatgggattggtcgctctggctcacacacttccgccctccacgctc
aatgaggtgcgcatggaaagtcacatgtttgtcttcagagtcaacatggacctgcaggtc
acctactgtgagaacaggatatcagagtatatggacctgagcccagctgaggtggttgga
cgtacctgctaccacttcatccatgcagaagacctagacaccatcagacagagccacgaa
gacttgctgcggaaagggcaggttgtgacggggtactatcgctggctgcagaggagagga
ggctatctgtggattcagtcctgtgccaccgtgtccattaaccacaaagcgccccatgag
cgtaacgtcatctgggtcaactatgtgctcagtcgcccagagctggcagacatgcctctg
gacttattacaactcccagaaagcctgagggcagagcggcttcaagcaagctcctcccca
tgcgacacctctccaaaggcacaaggctccacagggacacaaccattgaaaggcaggccc
gagacagaccacaaggggaaagaagcattctcgcacactgctgccagccaatcagagaac
accaggaagagattgcaccagtctgatgctgaaagcggccctcctgtggcaaggaggcgg
atggaggtgttcaggcaaagagaggacagcccatgtccctcctcagaccaagccagtgac
agcgaggtggaagaggacgatgagagggagaacgagtgggaccacaacctcaccagcaaa
cgggtgaagagagaagaggggccattgaaacaaggcaatggggccaatggagcaggtaaa
atccacaatggccgtgcagtgatccagcatcttaagagtgtggtgaccaattcagggtcg
aatattaagactgaacaagaagtgatgggaacaactgtaggcccaggttctgggaggcac
tggagccaagctcagcccagcagtggaggaaccaatggcagcagtccaccttcccatcct
caaaattccacccctacagaagcttcatccaagggtctgtttaaccccccttccccaacc
ctgtcgccaaccattcctgccacatccatgcccagagatgatcggtctatccacggaggg
cgcgctccagactttgaactactgcagagactgactgcaagtggggctgcaggacatgtt
ctctttcaccccctggctcttggcccacaggggccccagagtctctatgctcccagcact
attcgctacgccccacctgagatgccaacagctcacactgaagggcaccgctcagaccat
gtggccaaaactcccgctttctttccccacttgcaaaggattgcatctctgccttccttt
aacggtttttctccagctgaacccatttttcctccacctctgcccttctgtatgaatgga
ctgaggggggcagcagggacagatgaggattga
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