KEGG   Cyprinus carpio (common carp): 109075274
Entry
109075274         CDS       T05134                                 
Name
(RefSeq) lissencephaly-1 homolog B-like
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar00565  Ether lipid metabolism
ccar01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    109075274
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccar03036]
    109075274
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccar04147]
    109075274
Chromosome and associated proteins [BR:ccar03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    109075274
Exosome [BR:ccar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109075274
SSDB
Motif
Pfam: WD40 WD40_Prp19 EIF3I WD40_WDHD1_1st WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_EML Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_Vps41 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_RIG_2nd LisH Beta-prop_IFT140_1st Beta-prop_SPT8 LisH_PAC1 Beta-prop_DCAF12 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Nucleoporin_N Beta-prop_NUP159_NUP214 Beta-prop_WDR11_2nd Pox_A_type_inc ARMC9_LisH LisH_2 SutA-RBD
Other DBs
NCBI-GeneID: 109075274
NCBI-ProteinID: XP_042567074
UniProt: A0A9Q9VLB2
LinkDB
Position
A21:complement(17706838..17738489)
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSVFKKEAELDMNEELDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEATAEITLGGPVGQKRDPKEWIPRPPEKYALSGHRSPVTRVIFHPVF
SLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQSGKLLASCSADMTIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMV
RPNQDGTLLASCSNDQTVRVWVVANKECKAELREHEHVVECISWAPESAHPTISEATGSE
NKKSGKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGLLFHPGGRFVVSCADDK
TLRIWDYKNKRCMKTLSAHEHFVTSLDFHKTSPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagagacaacgagatgaactaaatcgagcaatagcagattatttgcgc
tctaatggctatgaagaagcatattctgtctttaagaaggaggcagagttggatatgaat
gaagagttggataagaagtatgcaggccttttggaaaaaaaatggacttcagtcatcaga
ttacaaaaaaaggtaatggagttggagtccaaactaaatgaagctacggcggagatcact
ttaggaggccccgtgggacagaaacgagaccccaaagagtggatcccgcgcccgcctgag
aagtacgccctcagcggccacagaagccctgtcacacgcgtcatcttccaccctgtgttc
agcctcatggtctccgcctcagaggatgccactataaaggtttgggactacgaggctggg
gatttcgagcgcaccctgaagggtcacactgactcagtgcaggacatctcctttgatcag
tctggaaagctgctggcttcttgttctgcagatatgaccatcaaactctgggacttccag
ggttttgagtgcatcagaaccatgcacggacatgatcataatgtgtcgtcagttgccatc
atgcccaatggtgatcacatagtgtctgcttccagggataagaccattaaaatgtgggag
gtggccacaggttactgtgtgaagacattcacgggtcacagggagtgggtgcgtatggtc
cggccaaatcaggacggcacactgttggccagctgctctaatgaccagacggtgcgtgtg
tgggtggtggccaacaaggagtgcaaggcggagctgcgggagcacgagcatgtggtggag
tgcatttcctgggcccctgagagcgcacaccccaccatatctgaggctacaggttctgag
aacaagaaaagtggaaagcctgggccattcctgttatctggatccagagacaagaccatt
aaaatgtgggacataagtactggcatgtgccttatgacactggtcggtcatgataactgg
gtgcgtggattgctgttccatcctggtgggagatttgtagtgagctgcgctgatgacaag
acccttcgtatctgggactataagaacaagcgctgcatgaagaccctgagtgcccatgaa
cactttgttacctctctggatttccacaagacttctccttacgtggtgacaggaagtgta
gatcaaacggtcaaagtgtgggaatgccgctga

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