Cyprinus carpio (common carp): 109075317
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Entry
109075317 CDS
T05134
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccar01002
]
109075317
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109075317
Enzymes [BR:
ccar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
109075317
Peptidases and inhibitors [BR:
ccar01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
109075317
Ubiquitin system [BR:
ccar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
109075317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH_UBL1
Dsc3_N
FAST_1
RasGEF_N
DUF2014
Motif
Other DBs
NCBI-GeneID:
109075317
NCBI-ProteinID:
XP_042619869
Ensembl:
ENSCCRG00000028441
UniProt:
A0A9R0B276
LinkDB
All DBs
Position
A9:19043404..19079922
Genome browser
AA seq
2609 aa
AA seq
DB search
MTATTRGSPVGGNDGQGQAPDGQSQPPLPQNQTSSPNSSNENSPVSPPDDQGQGGSSTPL
EEEEPAFPHTELAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLCKKGLDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNAHRLVELCVTKLSQDWFPLLELLAMATNP
HCKFHIYNGTRPSESVPAGVQLAEDELFARPPDPRSPKGWLVDLVNKFGTLNGFQILHDR
FMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKSLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKESWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKMQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPINLLKSLE
GQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMENMRQFSKEHADFDPQTVRPGSR
YSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGD
EPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLE
LIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQANQVEIHEDFIQSCFDRLKASY
DTLCVLDGDKDSINCARQEAIRMVRVLTVLREYITECDSDYHEERTILPMSRAFRGKHIT
LVVRFPNQGRQVDDLDIWSHTNDTIGSVRRCILNRIKANSTHTKIELFIGGEIIDPADDR
KLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHFSDGPNPEVESCLP
GVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNTTVENLRAICLDHAKL
GENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASGTLGEDASDFQYNFLKSGGLPLVL
SMLTRNNFLPNADMETRRGAYLNALKIAKLLLTAVGFGHVKSVAEACQPVVEGTIPVSPI
NQTTHDQALVLQNALQNIPNPSAECMLRNVAIRLAQQISDENFFQASKYIPDICVIRAVQ
KIVWASGCGSVQHVFSSNEEISKIYEKTNAGNEPDAEDEQVCCEALEVMTLCFALMPTAL
DALSKEKAWQTFIIDLLLHCQNKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGS
TAKERAKHAADYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGEPGVE
ETILEGHIGVTKELLAFQTPEKKFYIGCEKGGASLIKELMDDFLFPASNVYLQYMKSGEF
PTEQAIPVCCTPATINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCEPLTEWEYLPPV
GPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGSDVDDDMSGDEKQDNE
SNVDPRDEVFGYQHQFEDKPSLGKTEDRKEYNIGVLRQLQVIFGHLAASRLQYYVPRGFW
KQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCP
HRYECEESFTTLNVDIRNHQNLIDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKK
FPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGSDVHPENQQQV
IQQNEPSEPEPPCSSRYRLVGVLVHSGQASGGHYYSYIIQRNGSGCEGERNRWYKFDDGD
VTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTLDKDSE
LVKYITELTVTSKPHQVKMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIRKLLTCNSVYL
NSPPGQDHLLPEAEEMAMISIQLAARFLFSTGFHTKKIVRGPASDWYDALCILLRHSKNV
RYWFAQNVLFAYPNRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPSPIASPGPSS
QSCDNLSLSEHLFRAILNLLRREVSEHGRHLQQYFSLFVMYANLGLAEKTQLLKLGVPAT
FMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVTSRMQSSINGNPPLPNPYGDPNI
TAPIMPLQQVVVDILFVRTSYVKKIIEDCSNSEDTIKLLRFCCWENPQFSSTVLSELLWQ
VAYSYTYELRPYLDLLLQILFIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRA
YQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNTQYTYNNWSP
PVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTKHEVVSEEDAGRNPSSTQQLLPG
EVTGQQQHTVRLEPDEQEALDEQDTSPPEDTALYPHSPGTKFQQQNNLPHTQPYTGPAAQ
LVNNPQRPGPRTQENWEPPEEVPPSQTKD
NT seq
7830 nt
NT seq
+upstream
nt +downstream
nt
atgacggccacgacccgtggctcccctgtgggagggaatgatggtcagggccaggctccg
gatggccagtcccagccacccctgccccagaaccagacatcctctcccaactcatccaac
gagaactccccagtgagcccaccagatgaccagggtcaggggggcagttccactcccctg
gaggaggaggagccagctttcccccacactgaactggccaagctggatgacatgatcaac
aggcctcgctgggtcgttccagttttgccaaagggtgaattagaagttcttcttgaagct
gctatagatctttgtaaaaaaggacttgatgtcaagtgtgaagcatgccagaggtttttc
agagatggcttgacaatatcctttacaaaaatactgacagatgaagctgttagtggatgg
aaatttgagatccaccggtgcatcattaataatgcccaccgactggtggagctgtgtgtg
accaagctctctcaggactggttccctctgctagaactcttggcgatggccaccaacccc
cactgtaagttccacatctacaatggcactcggccctctgagtcggtgcctgctggggtt
cagctagctgaggatgagctttttgcccgtccacctgaccctcgctctccgaagggctgg
ttggtggatttagtaaacaaatttggcacgttaaacgggtttcaaatcctgcatgatcga
ttcatgagtggccaagctctgaatgttcagatcattgctgcactcattaagccttttgga
cagtgctatgagtttctcactttgcacacagtgaagaagtacttccttcccatcatagaa
atggttccccagtttctagaaaacctcacagatgaggaattgaaaaaggaagcaaagaac
gaagccaaaaacgatgccctgtctatgataatcaaatctttgaagagcctggcttcccga
gtaccaggacaagaggaaacagtgaagaatttagagatatttaggttaaaaatgatactt
aggttattgcagatttcttcttttaatggtaaaatgaatgcactaaatgaagtgaacaag
gtgatttcaagtgtttcctactacacacatcgtcatggcaatcctgaagaggaagagtgg
ctgacagcagaacgcatggcagaatggattcagcagaacaatattttgtctattgtgctg
cgagacagccttcatcagccacaatatgtggagaaactggagaagatcctgcgatttgtc
atcaaagaaaaggccctaacgcttcaggacctggacaacatctgggccgctcaagcaggg
aaacatgaggctattgtcaagaatgttcatgatcttcttgcaaagctggcatgggatttc
tcacctgaacagctggaccatctctttgactgcttcaaggagagctggactaatgcaagt
aaaaagcagagagagaagttactggaattgattcgtcgactggcagaggatgacaaggat
ggtgtgatggctcacaaagtactcaatctgctgtggaatttggcccatagtgatgatgtt
cctgtggatatcatggaccaggctcttagtgctcatattaagattttggactatagctgt
tcccaggacagggacacacagaagatgcagtggatagacagattcatagaagaattaaga
actaatgacaaatgggtgattcctgcactgaagcaaatacgggagatctgtagcctcttt
ggagaagccccccagaatttaagaaagaaaatacctattaacttactaaagagcttagag
ggtcaaacgcaacggagcccacatgtcttctatcgacatgacctaatcaaccaactgcag
cacaaccatgcactggtcactcttgtagcagagaacctgtctgcatacatggagaatatg
aggcagttctcgaaagagcacgcagactttgatccccagacggttaggccaggaagtcgg
tatagtcatgttcaggaggtccaggagcggctcaatttcttgaggttcttactgaaagat
gggcaactctggctgtgtgcacctcaggctaagcagatctggaagtgcctggcggagaac
gcagtattcttgtgtgatcgggaggcctgcttcaaatggtactccaaactcatgggggac
gaacccgaccttgatcctgacatcaacaaggacttttttgagaacaacgtactgcagctt
gacccctcgctgctgacagagaatggcatgaaatgttttgaacgattcttcaaggcagtc
aactgcagggagggcaagctggtggcaaaacgccgggcatacatgatggatgacttggag
ctgatagggctggattacctgtggagggttgtgattcaaggaagtgatgatattgctagc
cgagcaattgacttgcttaaagagatttatactaaccttggaccaaaattacaagccaat
caggtagagatccatgaggattttattcagtcttgctttgaccggctcaaagcctcctat
gacactctgtgtgtgctggatggagataaagacagcattaactgtgccagacaggaggcc
atccgcatggtgagagtactgacggtgctaagggagtatataaccgagtgtgacagtgac
taccacgaggagaggaccatcctgcccatgtccagggctttccgaggaaagcatatcacg
ttagttgtgcgtttcccaaaccaaggccgacaggttgatgatctggatatttggtcgcat
accaacgacacaattggctctgtgcgacgctgcattctgaatcgaataaaggccaacagc
acacacaccaagattgagctgttcatcgggggagagatcattgacccagcagatgacagg
aagctaatcgggcagctaaacctcaaagataaaacgctcatcacagccaagctcacccag
gttagcgccaatatgccttccagtccagacagctcctcagactcctccactggttcccct
gggaaccatggcaatcacttcagtgatggaccaaatcctgaagtggagagctgtcttcct
ggcgtgataatgtccctgcacctgcgctacatctctttcctctggcaagttgcagatctg
ggctgtaatctcaacatgcctctcctccgggatggagctcgtgttttaatgaagctcatg
cctccagataacaccacagtggaaaacctgcgagccatctgtctggatcacgccaaactc
ggcgaaaacagccttagccccacattggattcacgtttctttggcccatcaccatctcaa
gtgctttacttgatagaggtggtgtacgccttgctcatgcctgccagtgggacattgggc
gaggatgctagtgacttccagtacaacttcttgaagagtggtgggctgcccctggttttg
agcatgctgaccagaaataacttcctgccaaatgctgacatggagacccggcggggagct
tatctcaacgcactaaaaatagccaaactgctgctcacagctgtaggctttggccatgtg
aagtccgtggcggaggcctgccagcctgtggtggaggggactatccctgtatcgcctatc
aaccagaccacacatgaccaggctctagtgctacagaatgccttgcagaatatccccaac
ccctccgccgagtgcatgctgcggaacgtggccatccgcctcgcccaacagatctcagat
gagaacttcttccaggcttctaagtacatcccagatatctgcgtcattcgagcggttcag
aagatagtttgggcttctggctgtggctctgttcagcacgtcttcagttctaatgaggag
atcagcaagatctacgagaagacaaatgctggcaatgagccggatgcagaagatgagcag
gtgtgctgtgaagctctggaggtcatgaccctgtgttttgcccttatgcccactgcacta
gatgcacttagcaaagaaaaggcctggcagaccttcattatagatctgctgctgcactgc
caaaacaagtctgttcgtcaaatggcccaagaacagttcttcctcatggccaccagatgt
tgtatgggccataggcctcttctcttcttcatcaccctcctcttcacagttttgggtagc
actgcaaaagagcgggcaaagcatgctgctgattacttcactcttcttaggcacttactc
aattatgcatataacagcaacattaatcttcctaatgcagaagttctcttaaacaatgag
attgactggttaaagcgcatccgggatgaagtgaagaggactggagagcctggggttgag
gagaccattttggaaggtcacattggtgtcacaaaagagctgctagcattccagacccca
gagaagaagttctacattggctgtgaaaaaggaggtgctagtcttatcaaggagttaatg
gatgacttcctgttcccagcatctaatgtgtacctgcaatacatgaagagtggagaattc
cccactgagcaggccatacctgtgtgttgcaccccagccacaatcaatgccggctttgaa
ctgctggttgcattagctgtcggatgtgtgcgaaatctcaagcagattgtggacacacta
actgatatgtactatttaggttgtgaaccacttacagaatgggaatatttgccaccagtt
ggtccaaggcccaccaaggggtttgttggtctgaaaaatgcaggtgcgacttgctacatg
aactcagtgatccagcagctctacatgattcctcccatcaggaatggcatcctggccatt
gaaggcacgggcagtgatgtggatgatgatatgtctggagacgagaagcaagataatgag
agtaatgtggatccacgggatgaggtgtttggctatcagcaccagtttgaagacaaacct
tctctcggtaagacggaagacaggaaggaatacaacattggggttcttcggcagttgcag
gtcatttttggacatttggctgcctccaggttgcagtattacgtgcctaggggattctgg
aagcaatttcggttgtggggtgaacctgtcaatctgagggaacagcatgatgccctggag
ttctttaactcactggtagacagtttagacgaggctttgaaagcattgggtcaccctgcc
atgctgagcaaagtactgggtggctcttttgctgaccagaaaatatgtcagggctgtcct
cacagatatgaatgtgaggaatcgtttacgacgttgaatgtagatatcagaaaccatcaa
aatctaattgattctatggagcagtatgtgaaaggagacttgctcgagggtgcaaatgcc
tatcactgtgaaaaatgcaacaagaaggtggacacagtgaagcgtttactcattaagaag
tttcctccggtgctggccatccagctgaaacgctttgattatgactgggaacgagaatgt
gctatcaagttcaatgattactttgagttcccacgggagttagacatggagccctataca
gtagctggagtagctaagctggaggggtctgatgtgcacccagagaaccagcagcaggtg
attcagcagaatgagccgtcggagccggaacccccctgcagctctcgctatcgtttggtg
ggagttctggtccactcaggccaggctagtggaggtcattattactcctacatcattcag
aggaacggcagtggttgtgagggagaaaggaaccgttggtacaagtttgacgatggtgat
gtcactgaatgcaagatggacgatgacgaggagatgaagaaccagtgctttggtggagag
tacatgggtgaggtctttgaccacatgatgaaacgcatgtcctacaggcgacagaagcgc
tggtggaacgcctacattctcttttatgagcgaatggacacattagacaaggacagtgag
ctagttaaatacatcactgagctgacagtgaccagcaaacctcaccaggtgaagatgccc
tctgctattgaacgcagtgtgcgcaaacaaaatgtgcagtttatgcacaaccgtatgcag
tacagcttggagtacttccagtttatcaggaaattgctgacctgtaacagtgtctacttg
aattcaccgccaggtcaagaccaccttttgcctgaagcagaagaaatggctatgattagt
atacagctcgctgctagatttctcttcagcactgggttccacacaaagaaaatcgtccgt
ggccctgctagtgattggtatgatgctctgtgcatcttgctacgacacagtaagaatgtg
cgttactggtttgcacagaacgtcctctttgcatatccgaaccgcttctccgagtacctg
cttgagtgtcccagtgcagaggttcgaggggccttctccaaactcattgtatttattgca
catttctccctgcaagatggaccctgcccttcaccgattgcctcacctggaccttcaagt
cagagctgtgataatttgagtttgagtgagcacttgttccgtgccatacttaatctgctg
agaagggaagtgtctgagcatggccgtcacctgcagcagtacttcagcctttttgtcatg
tatgccaaccttggcttggcagagaagacgcagctgttgaagcttggggtaccagctacc
ttcatgcttgtggctttggatgagggccctgggcctcctattaagtaccagtatgctgag
cttggaaagctctatactgtcgtctcacagctggttcgctgctgtgatgtgacgtcacgt
atgcagtcctcaattaatggaaaccctcccctgccgaacccatatggtgaccccaacatc
accgcacccatcatgcctctgcagcaggtggtggtggacatcctgtttgtgcgtaccagt
tatgtgaagaagattattgaggactgcagtaactccgaggacactatcaaactgctgcga
ttttgctgttgggaaaaccctcagttttcctccactgtgctgagtgaactactgtggcag
gtggcatattcatacacgtatgagttaaggccttacctggacttgctccttcagattttg
tttattgaggactcgtggcagactcacaggatccacaatgtgctgaagggaatccctgat
gaccgtgatgggctttttgacaccattcagcgctccaaaaatcactaccaaaagagagct
tatcagtgcatcaaatgcatggtggctcttttcagcaactgctcagtggcctatcagatt
ctccagagtaatggcgatttaaagaggaagtggacctgggcagtggagtggctcggtgac
gagctggaacgtagaccgtacactggcaatacccagtacacgtataataactggtcccct
cctgttcagagcaatgagacttctaatggatacttcctggagcgctcccacagtgcgcgt
atgactttagccaaggcctgtgagttgtgcccagaagagtgtcacttaacgaagcacgag
gtggtatctgaagaggacgctggccggaatccgtcctcgacacagcaacttttgccaggg
gaagtgacaggccaacaacagcacaccgtaagacttgagcctgatgagcaggaggccctt
gatgagcaggacacctctcctccagaggacactgctctataccctcactctccaggcaca
aagtttcagcagcagaataacctcccgcatacgcagccgtacactggccccgcagcacag
ctcgtcaacaaccctcagcgtccaggcccacgaacacaagagaactgggagccccctgag
gaggtgccgcccagtcagactaaagactaa
DBGET
integrated database retrieval system
