Cyprinus carpio (common carp): 109075905
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Entry
109075905 CDS
T05134
Name
(RefSeq) short transient receptor potential channel 1-like
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109075905
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109075905
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
109075905
NCBI-ProteinID:
XP_042607670
Ensembl:
ENSCCRG00000039652
UniProt:
A0A9Q9XU61
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Position
B24:5066689..5086123
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AA seq
800 aa
AA seq
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MHINALPYSLSVIMAALYQGTDSSSPDKYLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEEKRHGELNINCVDVLGRDAVTISIENENLEILQLLLVHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLIQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFKLSA
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHKSSEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKILYVLSVALMWP
LLSICYLLGPRSRVGQVIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGKKNTMGPPLEL
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHSKFKN
VEERPFEERKNWDAFHPLLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEF
GKFLGLFLLVLISFTIGLTQLYGKDKDLSSSKNTTKDCTGIFCREQSNDTFHTFMGTCYA
LFWYIFSLAHVALFVTRISYTEELRSFVGALIIGTYNIVVVIVLTKLLVAMLHKSFRQIA
NHEDKEWKFARAKLWLSYFDDKCTLPPPFNILPCPKTVCYLVISLSKWICSHTSTGKVKR
QNSLKEWRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLSDLRQDLSKFRN
EMRDLLGFRTSKYAMFYPRS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaatgctttgccgtactctctctccgttataatggctgctctatatcagggc
acggactcgtcttctccggataaatatctggcgttaaaagacgtcagagaggtgaaggag
gagaccactctggacgagaagctctttctgctggcctgcgagaagggagactactacatg
gtgaagaaacttctggaggagaaacgacatggtgaattaaacattaactgtgtagatgta
cttgggagagatgctgtcaccatttcaatcgaaaatgagaatctagaaatattgcagttg
ctcttggttcatggctgtcaggccacagatgcattattagtggctattgattcagaagtg
gtaggagcagttgacatcctactaaaccatcggcccaggcgttcctccaagccttctatt
gcgaaattgatccagcgcattcaaaacccagagtattccaccaccatggatgttgctcca
gtcattcttgctgcccaccggaacaattatgagattttgacaatgctattaaagcaagac
atctctctgccccgaccccatgctgtagggtgcgagtgcaccctctgtaatgccaagaac
aagaaggatagtcttcgccactcaaggttccgtctagatatctatcggtgccttgctagc
ccatccttgatcatgcttacagaagaagaccccattctgagagcattcaagctcagtgct
gatctgaaagagctgagcctggtggaagtggagtttcggaatgattatgaagaacttgcc
aagcaatgcaagatgttcgccaaggacctgctggctcaggcccgcaactctcgtgagctg
gaagtcatactaaaccataagtccagtgaggaccacgtagacaagagaggcctactagag
gaacgcatgaacctcagtcgccttaaactggccataaaatacaaccaaaaggagttcgtt
gcccagtccaactgtcagcagttcctgaacacagtgtggtttggcgagatggcgagctac
cgccgcaagcacacatgcttgaagatcctgtatgttttgagcgtggcactgatgtggcct
ctgctgtccatctgttacctgctgggaccccgttctcgagtgggccaggtcatccacaca
ccttttgtcaagttcatcatccatagtgcatcctacttcacctttctgctccttctgaac
ctttactcactggtctacaacgagggtaagaagaacaccatgggtccccctttggagctg
atagactaccttctcattctctggattataggcatggtgtggtctgatgtgaagcgtctg
tggtatgaaggattggaggacttcctggaagagtcacgcaaccagctgagctttgtcatg
aactcactttatttggccacttttgccctaaaagtggtggctcacagcaagtttaagaac
gttgaggaaaggccatttgaagaaaggaaaaactgggatgcattccatcccctcttggtt
gctgaaggcctttttgcattcgccaatgttctgagctatctccgtctgttcttcatgtat
accaccagctccatcttggggcctttacagatctccatgggccagatgctacaagagttt
gggaagtttcttggcttattcttgcttgtgctcatctctttcaccattggcctgacacaa
ctctatggaaaagacaaggacctatccagctccaaaaatacaaccaaggactgcacgggc
atcttctgtcgagagcagagcaatgacacctttcacacgtttatggggacatgttacgcc
ctcttctggtacattttttccctggcacatgtggcactgtttgttacaaggattagctac
acagaggagctgcgttcgtttgttggtgctcttatcattggtacctacaacattgttgtg
gtcatcgttctcaccaaactcctggtggccatgctgcataagagcttcagacagattgct
aaccatgaagataaggaatggaagtttgccagggccaagctgtggctcagctacttcgat
gacaagtgcacactgcctccacctttcaacatcctaccctgtcccaagaccgtgtgttac
ttggtcatcagcttgagcaaatggatctgttcccacacctccacaggcaaggtcaagaga
cagaatagcctcaaggaatggaggaacctgaagcagaaaagagatgagaactatcagaag
attatgtgctgtcttgttcaccgttacctaacctccacaaggcagaagatgcagagcacg
gaccaggccacggtagagaacctcagtgatctgcggcaagacctctccaagttccgcaat
gaaatgagggatcttttgggcttccgcacctccaaatatgccatgttttaccccagaagc
taa
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