Cyprinus carpio (common carp): 109076272
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Entry
109076272 CDS
T05134
Symbol
msi2b
Name
(RefSeq) RNA-binding protein Musashi homolog 2b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109076272 (msi2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109076272 (msi2b)
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109076272 (msi2b)
SSDB
Ortholog
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GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
PHM7_cyt
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
109076272
NCBI-ProteinID:
XP_042595651
UniProt:
A0A9Q9X5L9
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Position
B15
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AA seq
408 aa
AA seq
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MEGDGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPATAYGPVAAAAAVAAARGSGRGARGRGGYAAYPQSTGPGFPDYGFYSSPSDQRGP
PFSFADYGSLGPQAAQLLQSEHATSACNSPLQHLASPDQYKSPGTNPPRPGAFPGASSPG
PVADLYGPTSQDSGVGNYISAASPQPGSGFGHSIAGPLIATAFTNGYH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacgggagccaagccacatctggaagccctaacgattcgcaacacgacccg
ggtaaaatgtttatcggtggcctcagctggcaaacttcaccagacagccttagagactat
tttagtaaatttggagagatcagagaatgtatggtgatgagagatcccacgacaaaacgc
tccaggggatttggcttcgttacgtttgcggatgcggccagtgtagataaggtcctagct
caacctcaccatgaattagactcaaagacgattgatcctaaagttgcctttccaagacgc
gctcaacccaagatggtcacaagaacaaagaaaatatttgtaggcggattatcagctaac
acagtagttgaagatgtgaagcagtattttgaacagtttggcaaggtagaggatgctatg
cttatgtttgataaaactacaaatagacatagaggattcggctttgtaactttcgagaac
gaggatgtggtggaaaaggtctgcgagattcattttcacgaaatcaataataaaatggta
gaatgtaagaaggcccagccgaaggaagtgatgtttcctccaggaacgcgggggagagcc
agaggtctgccctacaccatggacgcctttatgctgggaatgggcatgctgagttatcca
aacattgtagcaacgtatggccgaggatacactggtttcgccccaagctacagctaccaa
ttccctggcttcccggcaacagcgtacggtccagtagcggcggcggcagcagtggcagca
gcacgcggctcaggtaggggggcccgtggaagaggcggctacgcagcataccctcagagc
acagggccaggcttccccgattacggtttctattcctcgccaagcgaccaacgggggccc
cccttctcctttgcggactatggctccctgggcccccaggcggctcagctgctgcaaagc
gagcatgccacatcagcctgcaactcccctctccagcacctggccagcccggatcagtat
aagagcccaggcaccaacccaccccggcctggagcctttcctggagccagcagtcccggg
ccagtggctgacctgtacggccccaccagccaggactccggcgtgggcaactacattagt
gctgctagtccccagcccggctccggcttcggacacagcattgctggtcctttgattgca
acagcttttacaaatggataccattga
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