Cyprinus carpio (common carp): 109076336
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Entry
109076336 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109076336
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
109076336
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
109076336
NCBI-ProteinID:
XP_042572251
UniProt:
A0A9Q9VW55
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Position
B1:5425615..5436329
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AA seq
849 aa
AA seq
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MGLKDHLDDGTGHILXLGLDLDYLHVKATDQQTGADAGLIMDSGLSDTGDVVAPCTRSCG
SSPQDDSEESAGSDSEPAHRHSHPLVNMLGDGSIHGVHPTHCKSPSLGMDSLVLDMVHQE
PGPVDTLREYKTKMEFALKLGYAEDLVRLVLNKLGSDALINDVLGELVKLGSKPENEGGT
QTLSQSTSTSSSSSSGTSSFCSFSDSLDSRRSESPSVEDKDNLRPIVIDGSNVAMSHGNK
EMFSCQGIQLAVDWFLERGHRDITVFVPAWRKEQSRPDALITDQEILRRLEKDKILVFTP
SRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLAVEKPEWKKFIDERLLMYSFVND
KFMPPDDPLGRHGPSLENFLRKRPIIPEHKKQPCPYGKKCTYGHKCKFYHPERGTQPQRA
VADELRASAKNSTVKSVGETGLVKSHSEPGGSRNDKAGDGKRSLPKRQLDPSIRAQSYSD
VEDKLCSKTKADLYKSNLALPPAPGGPPSCHGYSQDLKDHKQTQAEPHTNCESPDLYYSM
VRAYSGLSLPSQSSPERHFLSDADPRTSSVASDCSSDGSMSSDSYGMATHNEHSCMSSSD
LLLDEGIKCHHHHHHRRNYHLPSVIPPGFILSPATSNHPGFHHSIPRAYSFAPEDQQDPH
FQHSVSYMSPQRQHQVAGSRSSYPGDYPPLCQSNTHSQNSPLGRGLASTRVDSMSDSRLY
EHSPLLPRKPYVSQERKTSWDPYYREHPQQCYEPISFQDLSKNREQMWRMPWGCPSAPPP
PHLPHALSHQHQEPLALSRYQEAREKVFTNLCNIFPTELVQLIMGRYPHVTDAQQLAAAI
LAEKNNAGY
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaagaccatctggatgatggaacaggccacatcctanaactggggctggat
ctagactaccttcatgtgaaggctacagaccagcagactggcgctgacgctggacttatc
atggacagtggtttatctgacacaggtgacgttgtggccccctgcactaggagctgcggt
tcttctccacaagatgactcagaggaaagtgcagggtcagacagtgagcctgcacataga
cacagtcatcctcttgtcaatatgcttggtgatgggtccatccatggagtccacccaaca
cactgtaagtctccaagtctgggtatggattcactggttctggatatggtgcaccaagag
ccaggccctgtggatactctcagggaatacaagacgaagatggagtttgcccttaaactc
ggctatgcagaagacttagttcggctggttctgaacaagctcgggtcagatgcactgatc
aatgatgttcttggggagctggtaaaactgggcagtaagccagagaatgagggtgggaca
cagactctctcccaatccacttccacatcatcatcatcatcctctggcacatcttctttc
tgcagtttctctgactcacttgattctcgccggtcagagtctccttctgtggaagataag
gataacctccgcccaattgttattgatggcagcaatgtggccatgagccatggcaataag
gagatgttctcctgtcaaggcattcagcttgcagttgactggtttcttgaacgcggccat
cgagacattacagtttttgttccagcctggaggaaagaacagtcccgtcctgatgctctt
atcacagatcaggagattttgagacgtctggaaaaggataagattcttgtatttacaccg
tcacgtcgtgtccagggccgcagagtagtctgctatgatgataggtttattgttaagcta
gcttatgaatcagatggcattattgtctccaatgacaactacagagacttggctgttgag
aaaccggaatggaaaaaattcattgatgaacgccttctgatgtactcctttgtaaatgat
aagtttatgcctcctgatgatccattgggtcgacatgggccaagtcttgagaattttctt
agaaaaagacccatcattccagagcataagaaacagccctgtccatatggaaagaaatgc
acctacgggcacaagtgtaagttttaccatccagagcgtgggacacagccacagcgagcg
gtagcagatgagctccgtgccagtgccaagaactccacagttaaaagtgtgggagagaca
ggtctcgtgaaaagccacagtgagcctggaggctcccgtaatgataaagctggtgacggt
aaacgatctctaccaaagaggcaattggaccccagtatccgtgcccagtcttacagtgat
gtggaggataagctgtgttccaaaactaaagcagacctgtataagagcaacctagctctt
cctccagctccaggaggtcctccttcctgtcatgggtatagccaggacctgaaagatcac
aagcagactcaagcagaaccacacacaaactgtgaatctcccgatctttattactccatg
gttagggcatattctggcctaagccttccctctcagagcagtccagagcgtcacttcctg
tctgatgctgatccacggaccagctcagtggcatcagattgcagcagcgatggcagcatg
agctctgattcttatggcatggcaacccacaatgagcattcttgcatgagttcttctgat
ttgttactggatgaaggaatcaagtgtcatcaccaccatcatcatcgtagaaattatcat
ttaccctctgttattcctccagggttcattctctctcctgctacatctaatcacccagga
ttccaccacagcatacctcgtgcttatagttttgctccagaagatcagcaagacccccat
ttccagcactctgtctcctacatgtctccacaacgccagcatcaagtggcaggctcccgc
tcaagctatcctggagactatcctcctctctgccagagcaacactcactcccagaactct
ccactgggtcgtggccttgcctcaacacgtgtggacagcatgtcagactccaggctttat
gaacactctccattgcttcctagaaaaccttatgtatcccaagagcgaaagaccagctgg
gatccatattacagagagcacccacagcaatgctatgagcccatcagtttccaggatctt
tcaaagaaccgtgaacagatgtggaggatgccctggggctgtccttctgctcctcctcca
ccccatctgccccatgctttatcacaccagcaccaggagccacttgccttaagtcgttac
caggaagcacgagagaaagtgtttaccaacctgtgcaacatttttcccacagagctagtg
cagttgatcatggggcggtaccctcatgtgactgacgcccaacagctggcagcagccatc
ttggcagaaaagaacaatgctggatactaa
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