Cyprinus carpio (common carp): 109076423
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Entry
109076423 CDS
T05134
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109076423
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
109076423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_37
HTH_31
CUT
HTH_24
NOC3p
Motif
Other DBs
NCBI-GeneID:
109076423
NCBI-ProteinID:
XP_042597919
Ensembl:
ENSCCRG00000051501
UniProt:
A0A9Q9X9V8
LinkDB
All DBs
Position
B17:complement(7592386..7604100)
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AA seq
447 aa
AA seq
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MSHYTDEPRFTIEQIDLLQRLRRSGMTKQEILHALDTLDRLDREHVEKFGHRHAHGGSGV
SGVNHGNGSNATTSSNSCTTSSNNLTASSSTTSKATQTGYRGNGLSPSPSNSCDTSPPPT
VPTPVPVVAPMVQNGRDGLAAMPNGKLSPPRFAVSNTSSRAFAYELPDEEVDIDDKVEEL
MRMDSAIIKEEIKAFLGNRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWY
QLEKTTPGATLAMRPTPVALEDIVEWRQTPPPISSTQGSFRLRRGSRFTWRKECLAVMES
YFNDNQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIE
AAILESHGIDVQSPGGHSNSDEIDGNDYGVPVAADQVLGMDDNTGQIEHQDPIALAVEMA
AVNHSILALARQGGATSDIKTEVLDDE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcccattatacagatgagcctcgttttaccattgagcaaattgacctgctgcagcgg
ctacgtcggagcggcatgacaaagcaagagatcttgcacgccctggacaccctcgaccgg
ctggaccgcgagcacgtggagaagttcggccaccgtcatgcccacggcggaagcggggtg
agcggcgtcaatcatggcaatggcagcaacgccaccacctcttccaactcctgcactacc
tcctctaacaacctcacagcctcttcttcgacgacctctaaggccacgcagacgggatac
cgtggcaatggcctctctccctcccctagcaacagctgtgacacctccccgcccccgacg
gtacccacccccgtgccggtagtagcacccatggtccaaaatggacgggacggcctcgcc
gctatgcccaacgggaagctctctccaccccgcttcgctgttagcaacacctcttcgcgg
gcctttgcatacgagctcccagatgaggaagtggacatcgatgacaaagtcgaagagctc
atgagaatggacagtgctataattaaagaagagattaaagccttcttggggaaccggcga
atatcacaggcagtagttgcccaagtcacaggtatcagtcagagccggatctctcattgg
ctgctccagcagggctcagacctcagtgagcagaagaaaagagccttctaccgctggtac
caactagagaaaactacacctggtgcaacactagctatgcggcccaccccggtggccctg
gaggacattgtggagtggcgtcaaacccctcctcccattagcagcacccagggcagtttc
cgtctgcgccgcggcagccgcttcacctggaggaaagagtgtctggcggtgatggagagt
tatttcaatgacaaccagtaccccgatgaagccaagcgagaggaaattgccaacgcctgc
aatgcagttattcagaaaccagggaagaagctttcagatcttgagagggtcacgtctctg
aaagtttacaactggtttgccaacagacggaaggaaattaagagaagagccaacatagaa
gcagcaatcctggagagtcatgggattgatgtccaaagcccgggaggtcattccaacagc
gatgagatcgatggaaatgactacggtgtgccagtagctgctgaccaagttttgggaatg
gatgacaacaccggccaaatcgaacaccaggaccccatagctttggcagtggagatggct
gctgtcaatcacagcatcctggcactggcgaggcagggcggagccaccagtgacatcaaa
acagaggtgctggacgacgagtga
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