Cyprinus carpio (common carp): 109076519
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Entry
109076519 CDS
T05134
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccar00535
]
109076519
Proteoglycans [BR:
ccar00535
]
Extracellular matrix (ECM) proteoglycans
Others
109076519
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Pur_ac_phosph_N
Fn3_VIN3
Fn3_ROS1
Fn3_Dep-1_2nd
VWA_3
Ig_ANOS1
Motif
Other DBs
NCBI-GeneID:
109076519
NCBI-ProteinID:
XP_042628123
LinkDB
All DBs
Position
A16
Genome browser
AA seq
1876 aa
AA seq
DB search
MWVSGSRIKLWCPLISLALIQFLTPVSAQVPAPRRLRFKVLSAGRLLVSWKEPKGEYDGY
KFIYNNEPGGKTSELQIARGENKAIIKDFNPGKEYSVKVIAVSGNLHSRALQGKYTAEDQ
SSDGDTTQLQRLKEPAPVEEGNEISGVDQFVCTTSSIADIVILVDGSWSIGRINFRLVRM
FLENLVSAFDVGMDKTRIGLAQYSGDPRIEWHLNGFSTKDAVIDAVKNLPYKGGNTLTGL
ALTYILENSFKPESGARSNVPKIGILITDGKSQDDVIPPAQSLRSAGVELFAIGVKNADE
NELKAIASEPEETHVYNVADFSIMSTIVDGLTSKVCDGVEQQDKEIIRDSSTEETASPPQ
DLVTSEVTAHSFRVSWTHAPGSVEKYRVVYHPTGVDILEEIVVGGTKNSVVLQNLNSLTE
YEIAVFAVYRSAASDALRGSEITLALPTVRDLKVYDVTDNSMRAHWRDAEGASGYMILYA
PLSSENTDERELRVDESVTDVELTGLIPDSEYTVTVYAMFGEEASDPATVQETTMSLRPP
RNLRVSEVDHSSVRLNWDAASSKVKGYRVMYMKTDGVQTSEVDLGPVTNVFLKNLLPLTE
YTVAVFALYDAGQSEALSGGFTTKLVPAPFSLMTSEVTSESFRVSWSHPARDVVLYKMTW
SPTEAGEEREMMLDGAVDSYVIQDLSPFTEYKVSLSAIYKDVTESSAVVVLENTLGRTTE
VPTTVLSTTAFVHLGVINLWVNEETPFSMQVNWEVLDSDVDQYKVTYVSADRTEETVLVS
GNRRSVILQPLLSDTRYKITVTPFYANGESTALAMASTGKTLPLSGPSNLRVSDEWYNRF
RVSWDSPQFPTVGYRVIYKPISVPGPALETFVGDDVNTLLILNLLSDTEYSVQVIASYTT
GSSQPLTSKGKTLFLGVNSLSTYQVLSSSMCAQWQPHRHATVYRVVIESLLNGQKQEVRV
GGGASRECFFNLSPDTQYKISVYSLLQDTEGPAVTTMATTAPAPTQPPTAPPTTIPPPTI
PPAKEVCKAAKADLAFLVDGSWSIGDDNFQKIIRFLYSTTGALDVIGPEGTQVAIVQFSD
DARTEFKLSSYSDKEALLDAVQRITYKGGNTKTGRAINHVKEAIFAEDTGARRGIPKVLV
VLTDGRSQDDVNKISKEMQTEGYIIFAIGFADADYGELVNIASKPSERHVFFVDDLDAFK
KIEEQLITFVCEAATATCPSMLMSGNTLAGFRMMEMFGLVEKHYSSVQGVSMEPGTFNSY
PCYRLHKDALVSQPTRYLHPEGLPSDYTISMLFRILPETPQEPFALWEILDKNNEPLVGI
ILDNGGKTLTFFNYDYKGEFQTVTFEGSEIKKIFYGSFHKLHVAISKTAAKMVIDCKTVG
EKSINAAGNITIDGVEVLGRMVRSRGRRDNSAPFQLQMFDIVCSTSWASRDKCCELPGLR
VEKDCPAMPHACTCAQDSKGPPGPSGPPGGPGIRGSRGDRGEPGLTETAGHSHFVSAARL
VGPQGPSGEIGPPGPQGPPGPQGPNGLSIQGSPGAPGEKGEKGEIGLPGPQGVPGASGGP
GRDGPPGQRGLPGNDGPQGRQGPPGPMGSPGAPGAPGPNGLPGQNGDQGLPGPSGTKGER
GERGDMQSQAAVRAIARQVCEQLIQSHLSRYNSILNQIPSQSVSVRTVPGPPGESGRPGP
PGPQGEQGPPGRPGFPGASGQNGRPGERGLQGERGEKGSPGIGTQGPRGPPGPPGPPGEG
RTGSQGPPGRPGIQGTSGRPGIPGSPGPAGPPGYCDQNSCLRYNVGVQQLPSNPYQNYDP
ATNYNNDEEEEDPYGGYRAYPPQYYQPSYPDPHAARFGPAHPGDTVGMRSAGTQRFSRST
VQEGSVDESEVQAKAK
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgtcgggatcgaggattaagctgtggtgtccgcttatctcgctggcactgatt
cagtttcttacccctgtttcggctcaagttccagctccgagaagacttcgatttaaagtt
ctgagtgcaggcaggctacttgtctcatggaaggaaccaaaaggagaatatgatggctac
aaatttatatataataatgaaccaggtgggaaaacaagcgagttgcaaattgcaagggga
gagaataaagcaataataaaggattttaatcccgggaaggagtattcagtcaaggttata
gctgtgagtggaaacctgcacagccgagcacttcagggaaagtatactgcagaagaccag
agcagtgatggagacaccactcagcttcaaagactgaaagaaccagcacctgtggaagaa
ggcaatgagatctcaggagtggatcagtttgtctgcacaacttcttctattgcggatatt
gtcatcctggtcgatggatcttggagtattggacgaatcaattttcgtctggttcgcatg
ttccttgaaaacctggtcagtgccttcgatgtgggaatggacaaaacccggattggactg
gcccagtatagcggggatccacgaattgagtggcacttgaatggcttcagcacaaaagat
gcagtaatagatgctgtcaaaaacctgccatacaagggaggcaacactctcacaggtctt
gctcttacctacatccttgagaacagcttcaaacccgagtctggggctcgtagcaatgtt
cccaaaattggaattctgataactgacggcaaatcccaggatgacgttatcccacccgcc
cagtccctgagaagtgctggagtcgagttatttgccattggtgtgaagaatgctgatgag
aacgagctgaaggccatcgcctctgaaccagaggaaacacatgtttataatgtggcagac
tttagtataatgagcactatagtggacggcttgaccagtaaggtgtgtgatggagtggag
caacaagacaaagaaattatacgagattcttccactgaagagacagcgtctccaccccaa
gacttggtcacttctgaggtgactgcacacagttttcgagtgtcctggactcatgcgcct
ggcagtgtggaaaaatatcgggttgtttaccatccaaccggagtagatattctggaagag
attgtggtgggcggcacgaagaattcagtcgtcctgcagaatttgaactctctgactgaa
tacgagattgctgtgttcgctgtgtaccgcagcgcagcaagtgacgctctgagaggcagc
gagatcacactggctctgccaacagtgagagatctcaaggtgtacgatgtgacagacaac
agcatgagagcccactggagagatgcagaaggggcttctgggtacatgatcctttacgct
ccactgagcagtgagaatacagatgaaagagagctaagggtggatgagtcggtgactgat
gtggaattgaccggattgattcctgactcagagtacaccgttacggtctatgccatgttc
ggagaggaggccagtgatcccgctactgttcaggagaccaccatgtccctgagacctcca
cgtaacctgcgggtcagtgaagtggaccacagctctgtgcgactcaattgggacgcagcg
tccagtaaggttaagggctaccgtgtcatgtatatgaagacagatggtgtccagaccagt
gaggtggatttgggtccagtcaccaatgtgttcctgaagaacctgttacccttaacagag
tacaccgttgcagtttttgctctctacgatgccggccaatcagaggcactcagtggtgga
ttcactacaaagcttgtgccggccccgttcagcctgatgacatcagaggtgacctcagag
agtttccgggtcagctggtcacatcctgccagagatgtggtgctctataagatgacctgg
tcacccactgaagcaggagaagagagagagatgatgctggatggagctgtggactcatat
gtgattcaagacctgagtccttttacagagtataaggtgtcactgtcagccatctataaa
gatgtaacggagagcagcgctgtagttgtgcttgaaaatactttgggccggaccacagaa
gttcccaccactgttctctccactacagcatttgttcatctgggagtgattaacctgtgg
gtgaatgaggagacccccttcagtatgcaagtgaactgggaggtgctggactctgacgtg
gatcagtacaaagtgacatatgtcagcgcagaccgcacagaagagacagtgttagtctca
ggaaacagaagaagcgtgatcctgcaacctctcctctcagacacaaggtacaagatcaca
gtgacccctttttatgcaaatggagagtccacagctctggccatggcctcaaccggcaaa
acactgccactttcaggacccagtaacctaagggtgtctgatgaatggtataatcgcttc
cgcgtcagctgggacagccctcagttccctactgtgggttacagagtcatctacaagccc
atctctgtgccaggtccggctctagagacgtttgtaggggatgatgtgaacaccctgctg
atcctcaatctgttgagtgacacggagtacagcgttcaggtcatcgcctcctacaccacc
ggctccagccaacccctcaccagcaagggcaaaacactgttcctgggggtgaacagtctc
agcacataccaggtgctcagtagcagcatgtgtgcccagtggcaaccccaccgccacgcc
accgtctacagagtcgtcattgagtcactgctcaacggtcagaaacaggaagtgagggtc
ggtggtggtgcatctagagagtgcttcttcaacctttcccccgacacccagtacaagatc
agcgtctacagtcttttacaggacacagagggtcctgctgtcaccacaatggcaaccact
gctccagcacccacccagccaccgactgcaccacccaccaccatccctcctcccaccatc
cccccagccaaagaagtttgtaaagcagccaaagcagacctggccttcctcgtagatggc
tcctggagtattggagatgacaactttcagaagattatccgtttcctatacagcacaact
ggtgcacttgatgtgattggcccagagggaacacaggtggccattgttcagttcagtgat
gacgccaggactgagttcaagctcagctcctacagcgataaggaggctctgctggatgct
gtgcagcgcatcacctacaagggaggaaacaccaagacaggtcgagccattaaccatgtg
aaggaggccatctttgctgaggacacgggtgcaaggaggggcattcctaaagtgttggta
gtgctcacggatggccgatctcaggatgatgtcaacaagatctctaaagagatgcagacg
gagggctacatcatctttgccattggcttcgctgatgctgactatggagagctggtgaac
attgccagcaaacctagcgagagacatgtgttctttgtggatgatctggatgccttcaag
aaaattgaagaacagctcataacttttgtttgtgaggctgcgactgccacttgcccctcg
atgttaatgagtgggaacactttagctggtttccgtatgatggagatgtttggtttggtc
gagaagcactacagcagtgtgcaaggtgtctcaatggagcctgggactttcaacagctac
ccctgctaccggttgcacaaggacgccctcgtctcccagcctaccaggtatctacatcca
gaaggccttccctctgactacactatatctatgctgttccgcatactgcctgaaactcct
caggaaccatttgcattgtgggaaatcctcgacaaaaacaatgagccactggtgggcatt
atcctggataacggagggaaaacattaaccttcttcaattacgactacaagggagaattt
caaacagtgactttcgaaggaagtgaaattaagaagattttctatggcagtttccataag
cttcatgtggccatcagcaaaaccgctgctaaaatggtgatcgactgcaaaacggtggga
gagaaatccatcaatgctgcagggaacatcaccattgatggagtggaggttctgggacgc
atggtccgctcacgtggaaggagagataactcagcgccgtttcagctccagatgtttgac
atagtctgcagtacatcatgggccagtcgggataagtgctgtgagcttccaggcttgaga
gtagaaaaggactgtcctgccatgccccatgcctgcacctgtgctcaggatagcaaagga
ccacctggaccctctggacccccgggcggtcctggtatcagaggttcaagaggagatcgg
ggggagccaggcttgacggagactgctgggcattcacactttgtttcagcagcccggctg
gtggggcctcaagggccatctggtgagattggacctccaggaccgcaggggccaccgggt
cctcaggggccaaatggactgtccattcaggggtcaccgggggctccaggagagaaagga
gagaagggtgaaattggtctgccaggtcctcagggtgtaccaggtgccagtggaggacca
ggccgagatggacctccaggacagagaggcctaccgggtaatgatggaccccagggacga
cagggccctccaggaccaatgggaagccctggagctcctggggctccaggtccaaatgga
ttgccagggcaaaatggtgatcaggggctacctgggccttccggcaccaaaggtgaacga
ggagagagaggtgacatgcagtctcaggccgctgtccgtgccatagcgcgacaagtttgt
gaacagctaattcagagtcacttgtctcgctacaactctattttgaaccagattcccagt
cagtctgtttcagtacgaacagtaccaggtccaccgggtgagtctggtcggccaggacct
ccggggccacagggagagcagggtccccctggcagaccaggattccctggagccagtggg
caaaatggccgcccaggagagagaggtctccaaggagaaaggggagagaagggcagtcca
gggatagggacacaaggtcctcgtggtcctccagggcccccagggcctcctggagaaggt
cggacaggaagtcagggccctccagggagacctggaattcaaggcacctcaggacgtcca
ggtatccctggtagccctggtcctgcaggaccccccggctactgcgaccagaactcctgc
ctcagatacaacgttggagtacaacagttaccctccaatccctaccaaaactacgatcct
gccaccaactacaacaacgatgaggaggaagaggacccttacggtggctaccgtgcctac
cctcctcaatactaccaacccagttaccctgacccccatgcggccaggtttggccccgcc
caccctggtgacacggtggggatgaggtcagctggcacacaacgcttctcccgcagcacg
gtccaagaggggagcgtcgacgagtcggaagtgcaagcgaaggccaaataa
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