KEGG   Cyprinus carpio (common carp): 109076812
Entry
109076812         CDS       T05134                                 
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109076812
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccar03041]
    109076812
Spliceosome [BR:ccar03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    109076812
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    109076812
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 109076812
NCBI-ProteinID: XP_018948010
Ensembl: ENSCCRG00000003656
UniProt: A0A8C1GUH7
LinkDB
Position
A6:complement(21590070..21592360)
AA seq 313 aa
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTSVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHAERMCDIILPRLQKRQVLEEAELLDAR
ISALEEDLDEVETSEEEDEEEEKPERVQTPETHRRSYRDMDRPRRSPSPRYKRSRSPRRR
SRSPKRRSPSPRRDRDRDRHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPESR
SKKSHKRSRRGNE
NT seq 942 nt   +upstreamnt  +downstreamnt
atggctaatagaacggtaaaagatgccaatagtatacatggaacaaatcctcagtatctt
gtcgagaagattatacggacacgtatttatgagtccaagtactggaaagaggaatgtttt
gggcttacagctgagcttgtcgtggacaaagcaatggagctgaagtatgttggtggggta
tatggaggaaacatcaagccaactccattcttatgtctgaccctaaagatgctgcagatc
cagcctgaaaaggacattattgtggaattcatcaagaatgaagacttcaagtatgttcgt
ttgcttggagcaatgtatatgcgcctgactggaacttctgtggattgctacaagtattta
gagccattatacaatgactacagaaaaatcaaaagccagaacagaaatggggagtttgag
ttgatgcacgttgatgagtttatagatgagctgcttcatgcagagcgaatgtgtgacatc
atcctccctagacttcagaagagacaggttttggaggaagctgagctgctggatgctcgt
attagtgctctggaagaagatctagatgaggtggagaccagtgaggaggaggatgaggaa
gaagagaagccagagagagtgcagactccagagacacacagaagaagttacagagatatg
gaccggcctcgcagatctccttctccacgctataaacgcagccgttcacccagaagacgg
agcagatcacctaaaagacgaagtccatcacccagacgtgatcgagatcgggaccgtcac
cgcagcaaaagtccccgaagacaccgcagcagatccagggacagaaggcatcgctctaaa
tctccaggtcaccacagaagtcaccggcatcgcagtcactccaagtccccagaaagtcgg
tcaaagaagagtcacaagagaagtcgaagaggaaacgagtga

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