Cyprinus carpio (common carp): 109077083
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Entry
109077083 CDS
T05134
Symbol
lima1b
Name
(RefSeq) LIM domain and actin-binding protein 1 isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccar04812
]
109077083 (lima1b)
Cytoskeleton proteins [BR:
ccar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
109077083 (lima1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
109077083
NCBI-ProteinID:
XP_042589526
Ensembl:
ENSCCRG00000024257
UniProt:
A0A9Q9WV11
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All DBs
Position
B11:2940910..2969445
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AA seq
742 aa
AA seq
DB search
MDVGPFSRKQWASQSLRITAKELSLVGGRGKNNAITERFSKYQKAAEEASAEKKKSSVDS
APLSLRSGNLSVLKKRWEQTHQEKSAPQLSVAPVRPTARSASCKPTNPPEPRASSSKLMR
QPSLTQESTSHEKPAKIKADMESKQKKSVKEEAESTTTSDPCSPVEKPALPLKNLKMVYE
EGKSKVQTEVNSSSEDVDTQMGNKGTPSLKRSASIKDRMAKYQLAVTRKASFTVPRSASQ
SETEESVPSMDHKEISPPAGDGQIVSTLPESNCTKINGEPVHTSSPSGATPVSENKEPPK
VARKFNLPVHESCVSCLKTVYPLEKLVANQQIYHKTCFRCTFCSTKLSLGTYASLHGDIY
CKPHFSQLFKSKGNYDEGFGHRPHKEMWTPRTNEEEPERDENSKHFVVDSVIVKSTEQLS
PKVKESQLVKFTDFTPALETKSQTSPTSSMEKPQTPSVETRKLRVAWPPPADSDGSSKAS
SPVTEVGKGPSKLFRAKWPPEEEAPPAQRSPEKAELKSLRRSSSLKERSRPFSVAPSLAL
SNATKQESQLSHKVALVRRGSLEELRSQSKVKTDKTEVQEEAKIPDEKTKDSESQSKKNV
ESPAKFDRTEKMPSSILKQTQQTKREAEEPQQTKNEADLQQTNKESLTQLTKKEPELQQH
EVPTRHVEDEEKPVKCLSTSSELQSSQDTCSPTVEEKAHRKSQDVGFWDGEEAEESLTVE
EMIKRNRYYEDEEDEEEEVAIV
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggggccatttagcaggaaacagtgggcatcacagtctttacggatcacagcc
aaagagctctcattggttgggggccgtggcaagaacaatgccatcactgagcgcttttct
aaatatcagaaagctgctgaggaggcaagtgcagagaagaaaaaatcttctgttgacagt
gcgcctttgtccctgcgatcaggaaacttgagtgtactgaagaaacgctgggaacagaca
catcaggagaaatctgctcctcagctgagtgtggcacctgtgagaccgacggctcggtct
gcttcctgcaaacccaccaatcctccagaaccacgtgcttcctccagcaagctcatgcga
cagcccagcctgactcaagagtcaacctcccatgaaaaacctgcaaaaataaaggcagac
atggagagtaaacaaaagaagagtgtaaaagaggaggcagaaagtacgactacatctgat
ccatgttcccctgtggagaaaccagccttgcccctcaaaaacctcaaaatggtgtatgaa
gagggcaaaagcaaggtgcaaacagaagtgaacagcagctcagaggatgtggacacacaa
atgggaaacaaaggtacgcccagtctgaagcgcagtgcctctatcaaggacaggatggcg
aaatatcaattagcggtcaccagaaaggcttcttttactgtgccacgctctgcaagccag
tcagaaacagaggaaagtgtcccatccatggatcataaggagatttcgccacctgctggt
gatggacagatagtgagcacactccctgagtcaaactgcacaaagatcaatggagagcct
gtacacacatcgagtcctagtggggcgactcctgtatcagagaacaaggagcctcctaaa
gtggccaggaaatttaatctgcctgtccatgaaagttgtgtatcctgcctaaagactgtt
tacccattggagaaacttgttgccaatcagcagatttaccacaagacttgcttccgctgt
accttttgtagtaccaaactcagtttggggacttatgcttccctacatggtgacatctac
tgtaaacctcacttcagccagctatttaagtctaagggcaactatgatgagggatttggc
catcgaccacacaaggaaatgtggacaccacgaacaaacgaggaggaacctgagagagat
gaaaactcaaagcactttgtggtagactctgtgatagtgaagtctacagaacagttgagt
cctaaagtgaaggagtcacaactggtcaaattcactgacttcactccagctctagagaca
aaaagtcaaaccagcccaaccagctcaatggaaaaaccacaaaccccttctgtggaaaca
agaaaactgagagttgcgtggccacctcctgcagacagtgatggaagctccaaagcctcc
agtccagtcactgaagttggaaagggtccatccaagcttttcagagcaaagtggcctcca
gaggaggaagctccacctgctcagcggagccctgaaaaagcagaactgaaaagtcttcga
cgtagttcctcactcaaagagcggagccgtcccttttctgtggcaccaagcttggcatta
tccaatgctacaaaacaagagtcacagttgtctcacaaggttgctttggtaagacgaggc
tcactggaggagcttcgttcacagtcaaaagtgaaaacagacaaaactgaagtgcaagaa
gaggcaaaaatcccagatgaaaagacgaaggacagtgaaagccaatccaagaagaatgtt
gagagtcctgccaaatttgataggacagaaaagatgccctcctctattctcaaacagaca
caacaaacaaaaagggaggctgaggagccacagcaaacaaaaaatgaagctgatctacaa
caaacaaataaagagtctctgactcaactaacaaaaaaggagcctgagctacaacaacat
gaggttccgacacgccatgtggaagatgaggaaaaaccggtgaaatgcttaagcacttct
tctgagctccagtcttcccaagacacatgctctccaactgtggaagaaaaagcccatagg
aaatcccaggatgtgggcttctgggatggtgaggaggctgaggagtccctgactgtagag
gagatgatcaagaggaatcgctattatgaagatgaagaagacgaggaagaggaggtggca
atagtttga
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