Cyprinus carpio (common carp): 109077134
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Entry
109077134 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: calcium-activated potassium channel subunit alpha-1-like
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
109077134
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109077134
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
109077134
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
109077134
NCBI-ProteinID:
XP_042624113
UniProt:
A0A9R0B6Q6
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Position
A12:complement(25398646..25488846)
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AA seq
1374 aa
AA seq
DB search
MLPTEEAEDDDGDEKQLSIIMTYPLAAPSSVRNMDVIIPYTSDMPCDPRGQRMWWAFLAS
SMVTFFGGLFIILLWRTFKYLWTLCCHCKGKKKVKRPITVLSDGVIKVVGQRESEVAVTE
VGWMTSVKDWAGVMISAQTLTGRVLVSLFFALSIGALVIYFIDSSKPIESCQQFDKDYTL
QIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLR
ALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWXNFQNSQ
PLSYWECVYLLMVTMSTVGYGDVCAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRK
KYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEAL
FKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNY
HPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANL
FSMRSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPAVCELCYVKLKLLLIAIEY
KSDQRESSTLINPGNHVKMQEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGC
KRMLYSKKSAYKRMRLACCVACGGAEQGCSCMSDSVASNMEVLHRGFPFSPVSLYDNTTT
LRSSKSNYNGYIKSINDELNPTFLPQNPKPALMRVQCAVRGPPAVRSGRVSVPLVNNRKG
SLLSPAASYLHRLSLASSRELYHSSSAGTGASDAIRLHRACSLPVKYRYHSSHGSTSTIG
PHTLLVEEEQQSALSPKKKQRNGGMRSSPTCSPKIIRHDPLLVPGHDQMETMDENIKKYD
STGMFHWCPSKDIEKVTLTRSEAAMTVLSGHVVVCIFGDVKSALIGLRNLVMPLRASNFH
YHELKPIVFVGSLEYLKREWETLHNFPKVSILPGTPLSRADLRAVNVNLCDMCVILSANQ
NNIDDASLQDKECILASLNIKSMQFDDSIGLLQANSQGFTPPGMDRSSPENSPVHGLVRQ
VSTTTGANIPIITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSAT
YFNDNILTLIRTLVTGGATPELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPF
ADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLGAPSQCTKRYVITNPPYVFELVPTD
LIFCLMQFDHNAGQTRTNLSSHSTFCPSKTSSRLSIPSSARPGRSRSRDLRDKQNVPRTN
RGVSDKNWYTDEPENCFPRNTQSKHTNTHAANQINQYKSTSNIIQPIREVEEEP
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgctccccactgaagaagcagaagatgatgatggtgatgagaagcagctctccataata
atgacctatccactagcggctccgtcctcggttcggaacatggatgtgatcatcccctac
accagtgatatgccctgtgaccccagaggccagaggatgtggtgggctttcctcgcctcc
tccatggtcactttcttcggtggtctcttcatcatcctgctgtggaggacctttaagtac
ctgtggacgctgtgctgccactgcaagggtaaaaagaaggtaaaacgccccatcactgtc
ctcagtgacggtgtgattaaagtggtgggtcagcgggagtcggaggtggcggtcaccgag
gtgggatggatgacctcagtgaaggactgggccggggtcatgatctctgctcagacgctc
acgggacgtgtgctggtgagtcttttctttgctctgagcatcggagctcttgtgatttac
ttcatcgactcctcgaaacccatcgaatcctgtcagcaattcgacaaggactacactctg
cagatcgatatggccttcaatgtgtttttcctcttgtattttggactgcgtttcatcgca
gccaatgataagctgtggttctggctggaggtgaattcagtggtggacttcttcaccgtc
ccgcctgtgtttgtgtccgtgtatctgaacaggagctggctgggactgaggttcttaaga
gccttgaggctgatccagttttcagaaatattacagtttttaaatatcttaaaaacaagc
aactccataaagttggtgaatctgtgctcgatctttataagcacatggctgacggctgcg
ggcttcatacatttggtggaaaactcaggggatccttggngaaacttccaaaattcccaa
ccgctttcctactgggagtgtgtgtacttactcatggtaaccatgtccacagtgggttat
ggagatgtttgtgctaaaacaaccctcggccgcctcttcatggtcttcttcattctcgga
ggattggccatgtttgccagctacgttcctgaaatcatagagttaataggaaaccgcaag
aaatatggtggttcctatagtgcagtaaatgggagaaagcatatagtcgtctgcggtcac
atcacactggagagcgtctccaacttcctcaaagacttcctacacaaggacagggatgat
gtcaatgtagaaattgtttttctccataatatttcccctaatcttgagctggaagcctta
ttcaagagacacttcacacaggtggagttttaccagggatccgtcctcaaccctcacgat
ctcgctcgagtcaagattgagtcggccgatgcctgtctgatcttagccaataaatactgt
gcagatcctgacgctgaagatgcatccaatatcatgagggtgatctccattaaaaactat
catccgaagatccgaatcatcacacagatgctgcagtaccacaataaggctcatcttctc
aacatcccgagctggaactggaaggaaggcgatgacgccatctgcctcgccgagctgaag
ctgggcttcattgctcagagctgcctggcacagggtctgtccaccatgctggccaacctc
ttctccatgaggtcctacatcaagattgaagaagacacatggcagaagtattatttagaa
ggagtagccaatgaaatgtacacggagtatctgtccagtgctttcgtggggctgtccttc
cccgccgtttgtgaactctgctacgttaagctgaaactccttctgatcgcgattgaatat
aaatcagaccagagagagagtagcacgctgattaacccgggcaatcatgtgaagatgcag
gagggaacactgggcttctttatcgccagtgatgccaaagaggtgaagagggcacttttc
tactgtaaagcttgtcatgatgacattacagacccaaaacggatcaaaaagtgtggatgc
aaacggatgttgtattccaagaagtctgcctacaagagaatgcgtctggcatgttgtgta
gcttgcggtggggcagaacagggctgctcgtgcatgtcagacagtgtggctagtaacatg
gaggttctgcaccgtggcttccccttctctcccgtgtctctgtatgataacacgaccact
ttacgctcgtctaaaagtaactataatggatacatcaaatcaataaatgatgagctcaat
ccaacattcctgccccagaatcccaaacccgccctaatgcgagttcagtgtgcagtgaga
gggcctcctgctgtccgaagcggtcgtgtgtcagtgcctttagtaaataaccgtaaaggc
agtctgctgtcaccggctgcctcatacctgcacagactcagtctggccagctctagagag
ctctatcatagcagcagcgctggcacaggagcatctgatgccatccgcctgcatcgggcc
tgtagtctgcctgttaaatacagatatcattccagccacggctccacctccaccatcggc
ccgcacacgctcttagtggaggaggagcagcagtcagctctgtcgcccaagaaaaaacag
cgtaacggagggatgagatcatcgcccacatgctcacccaaaatcatcaggcacgacccg
ttgttggtcccaggtcacgatcaaatggaaacaatggacgagaacataaagaaatatgat
tcgacaggaatgtttcactggtgtccatcaaaagacatagagaaggtcaccctgactcgc
agcgaagcggccatgacggttttgagcggtcacgtggtggtttgtatattcggtgacgtg
aagtcggctctgatcggtctgcgtaacctggtgatgcctctgagagccagtaacttccac
tatcacgagctgaagcccatcgtgttcgtgggctctctggagtatctgaagagagagtgg
gagacgctacacaacttccccaaagtctccatcttacccggaactccactgagtcgggcc
gatctgagagccgtcaacgtcaacctgtgtgacatgtgcgtcatcctttcagccaatcag
aacaacatcgacgatgcttctctgcaggataaggagtgtattctggcgtctctcaacatc
aagtccatgcagtttgatgacagtattggactcctgcaggccaactctcaaggtttcact
cctcctggaatggatcgctcgtctccagagaacagtcccgtgcacggattggtgcggcag
gtgtccacaaccaccggagcaaacattcccatcatcacagagctcgtgaacgactcaaac
gtccagtttctggaccaggatgatgacgatgaccccgacacggagctgtacctcacgcag
ccgttcgcctgtgggacagcgttcgccgtcagtgtgctggattcattaatgagtgccacg
tacttcaatgacaatattctgactctgatccggacgctggtgaccggcggagccacgccg
gagctggagggtctgctggcggaggagaatgcgctgcgcggaggatacagcacaccgcaa
acactggccaacagagaccgctgccgcgtcgcacagctagcgctttacgacggacctttc
gctgatctgggggatgggggctgttatggtgatttattctgtaaagcgctgaagacgtac
aacatgttgtgttttggaatctaccggttaagagacgcacatctgggagcacccagccag
tgcactaaacgatatgtgatcacgaatcctccgtacgtcttcgagctggtgcctacagat
ctgatcttctgcctgatgcaattcgaccacaacgcgggccagacgcgcaccaacctgtcc
tcccactccaccttctgccccagcaagacgtcttcccgcctctccatcccctcatccgcc
cgtccgggacgcagccggagccgcgacctgcgcgacaaacagaatgtgcccaggacgaat
agaggggtttcagataaaaactggtacacagatgaacccgagaactgcttcccaagaaac
acgcaaagcaaacacaccaacacacacgcagccaatcagatcaatcagtacaaatccacc
agcaacatcatccagccaatcagagaagtggaggaggagccttga
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