Cyprinus carpio (common carp): 109077227
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Entry
109077227 CDS
T05134
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109077227
Enzymes [BR:
ccar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109077227
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
109077227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
HA2_N
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
109077227
NCBI-ProteinID:
XP_042624035
Ensembl:
ENSCCRG00000044261
UniProt:
A0A9Q9YQP8
LinkDB
All DBs
Position
A12:23908717..23921298
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AA seq
730 aa
AA seq
DB search
MAGNSEISEGELQREEGSDDLFEFGDDLELNQFDGLPYSSRYYRLLQERKTLPVWKYRHE
FMTLLENNQLLIVSGTTKTGKSTQIPQWCAELCLSAQYQHGVVVCSQIQRRQAVDLALRV
ADEMDVNIGHEIGYSIPLETCCSSDTILRFCTDDVLLREMMSDPMLEHYGVVVIDQAHER
TVSTDVLLGLLREVLLQRPELRVVVLSAPPASDTLLTHYGNVPRLHLDAPCAGEVIHSNS
SSAESFYSALRLTLEVHRSREPGDVAVFLASDQEVVCACNILTKEASRMSVSLGELLAVP
LCPGHTGMCPPITESPQKSRRVFVSCSQSEDLFWLVDTITFVIDTGVEKRLVYNPRVRAS
SEVIRPISKCQAEIRKRLTGSTGKCFCLYPEDVQLPAEIPPRILESNITSTALFLKRMET
AGIRHCDFISRPDPESLMQALEELDYLAALDNDGNLSEMGIIMSELPLDPQMAKALLASC
EFDCASEMLTIAAMLTAPSCFIEPPVGMVTEVMRCHVKFQHPEGDHFTLINIYNTFKRSQ
REPYFSQEQWCEEYFLCCDALQTADAIRAQLTDILKRIELPISEAAFGTKTNALNIKRAL
LAGYFMQIARDVDGSGNYFMLLNKHVAQVHRLSGYGAKAHKLGLPEWVLFHEYNLSDNNC
IRTVTQISPQAFLQMAPQYFFCNLPPSESKEILQHILDRDRTRNARTKPQPAATETKTEE
AESHDRCVIQ
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaacagcgagatatccgaaggagaactccagagagaggagggatctgatgat
ctgttcgagtttggagatgatctggagctcaatcagtttgatggactgccgtattcctcc
agatactacagactcctgcaggagaggaaaactctgcccgtttggaaatacagacacgaa
ttcatgactttgctggaaaataatcagcttcttatagtctcaggcacaacaaagactggc
aaaagcacacagatccctcagtggtgtgcagagttgtgtctgtctgcacagtaccagcac
ggtgtggtggtgtgcagtcagatccagagacggcaggctgttgatttggccctccgtgtt
gcagacgagatggacgtaaacatcggccatgagattggatacagtatcccgctggagacg
tgctgctccagtgacactattcttaggttctgcactgacgacgtcctgctgcgggagatg
atgtcagaccccatgctggagcattatggggtggtggtgatagaccaggcccacgagagg
accgtgagcactgatgttctgctgggtctgctgagagaggtgcttctccagcggcccgag
ctcagggtggtggtcctgtccgctcctcctgcttcagacacgctcctcacacactacggg
aacgtcccacgcctgcatctggacgccccgtgcgctggtgaagtgatccacagcaacagc
agcagcgctgaaagcttctattcggctctgagactcacgctggaggtccatcggtccaga
gagccaggagacgtagctgtgtttttagcatctgatcaggaggtggtctgtgcctgtaat
attctcactaaagaagcgtccaggatgagtgtatctctgggagagctgttagctgtacca
ctgtgtcctggacacaccggaatgtgtccaccaatcacagaaagcccacagaagagtagg
cgggtcttcgtttcctgcagccaatcagaggatctgttttggctggtggacactattaca
tttgtcatcgatactggagtggagaagagattagtgtataacccacgagtgagagccagt
tcagaggtcatccgacccatcagtaaatgtcaagctgaaattcgtaaacgactgaccgga
tcaacagggaagtgcttctgtttgtatcctgaggacgttcagctgcccgctgagatccct
cctcgcattctggagtccaacatcacgtccacggcgctctttctgaagaggatggagacg
gccgggatccgacactgtgacttcatcagcagacctgatcccgagagcctcatgcaggcg
ttggaggagctcgattatctcgctgctttggacaatgatggaaacctgtctgagatgggc
atcatcatgtcagagcttcctctggatccgcagatggccaaggctctgttagcgtcctgt
gagttcgactgcgctagtgagatgctaaccatcgctgcaatgctcacagcaccaagctgc
ttcatcgagcctcccgttggcatggtaacagaagtcatgcgctgtcatgtgaagttccag
catcccgagggcgaccacttcaccctcatcaacatctacaacaccttcaaacgcagccag
agggaaccatatttcagtcaggagcagtggtgtgaggagtacttcctgtgctgcgacgcc
ctgcagacggcagacgccatcagagcccaactcacagacatcctcaaacgcatcgagctg
cccatttcagaagcagccttcggcaccaaaaccaacgccctcaacatcaagagagcgctg
ctcgcgggatacttcatgcagatcgccagagatgtggacggttcggggaattacttcatg
ctgctgaacaaacacgtggctcaggttcaccgtctgtcgggttacggagcgaaagctcat
aaactgggtctgccggagtgggttctgttccacgagtacaacctctccgacaacaactgc
atccgcaccgtcacacagatctcaccgcaggcgttccttcaaatggcaccgcagtatttt
ttctgtaatctgccacctagtgagagtaaagagatcctgcagcacattctggacagagac
aggacgaggaatgcaaggacaaaacctcaaccagctgcgacagaaacaaagacagaagag
gccgaatcacatgaccgttgtgtcatacagtga
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