Cyprinus carpio (common carp): 109077388
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Entry
109077388 CDS
T05134
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04140
Autophagy - animal
ccar04142
Lysosome biogenesis
ccar04145
Phagocytosis
ccar04148
Efferocytosis
ccar05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
109077388
04142 Lysosome biogenesis
109077388
04140 Autophagy - animal
109077388
04148 Efferocytosis
109077388
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109077388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109077388
Membrane trafficking [BR:
ccar04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109077388
Hops complex
109077388
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_Vps41
aq_1631
zf_RING_Vps8
zf-C3HC4_2
zf-ANAPC11
zf-RING_16
zf-RING_5
zf-rbx1
zf-C3H2C3
zf-RING_2
zf-RING_11
DUF1664
KNOX2
RBSN_mid
STX17_N
Apolipoprotein
zf_RING_Vps8_fungal
DUF2175
zf-RING_UBOX
DUF4446
LETM1_C
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
109077388
NCBI-ProteinID:
XP_042602187
Ensembl:
ENSCCRG00000035803
UniProt:
A0A9Q9XHZ5
LinkDB
All DBs
Position
B20
Genome browser
AA seq
975 aa
AA seq
DB search
MASILDQYEDSQNIRQHSRVSAANIGITHSGFVNVRLEEEKPIFNKQRIDFSPPEKINNL
LVCNNQLCMSLGKDTLLRIDLGKPDQPNQIELGRKDDSKVYKLFLDPTGSHLVISLTTNE
CVYLNRNTQKVRSLSRWRGHLIESIGWNKLIGSETNTGPILVGTSHGIIFEAEISASEGS
LFNTNPDQYFRQVHSLEEDGKPAPVCCLEVERGLESKYFIVATTRKRLFQFVGKLAEGSE
QQGFSSIFAQNQDLLPSFQEFPVNMGYSEITFYTSKLRSSPKSFAWMMGNGVLYGQLDYV
RPDSLLSDVQVWEYTSDIDLNSVKPISIVLTQFHFLLLLPDRVKSICTLNGQVVHEEKFF
PEKFGSLKKMIKDPITGLVWIYTEKAVFRYHIQREARDVWQMYMNMNKFDLAKEYCKDRP
ECLDMVLAKEAEHCFQNKRYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLIKKLTN
LKPTEKTQITLLVTWLTELYLNRLGQLEADDGKQHLFLETREEFRTFLKSSKHKDCFYNN
RNTIYDLLASHGDVDNMVYFSVIMQDYERVISHYCQHDDYSAALDVLSKHCDDKLFYKFS
PVLMQHIPKKVVDAWIQMGNRLDPKNLIPALVNYSQMGSMQQINETIRYMEFCVYELDVK
DEAIHNYLLSLYAKHKADALLWYLEQAGTHVSDIHYDLKYALRLCAEHGYLQACVLVYKI
MELYEEAVDLALQVDVDLAKTCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNCLSS
CNLLKIEDILPFFPDFVTIDHFKEAICNSLEEYNQHIEELKQEMEEATESAKRIREDIQE
MRNKYGVVESQEKCATCEFPLLNRPFYLFLCGHMFHYDCLLQEVIPHLSAFKQNKLEELQ
KKLAATTQTTKSRHKPKEEDTVSLGKGQGSREQIKSDIDDIIACECVYCGELMIKSIDKP
FIDPHKFDQEMSSWL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcatctattctggatcagtatgaagattctcagaacatccgtcagcacagccgtgtt
tcagcggccaacatcgggattactcattcaggctttgtgaatgtaaggttggaggaagag
aaacccattttcaacaagcagcgcatcgatttctcacctcccgaaaaaatcaacaattta
ttagtgtgcaacaaccagttatgcatgagtctggggaaagacaccctgctgagaattgat
cttggaaaacctgatcagccaaatcagattgaactgggaagaaaggatgacagcaaagtg
tacaaactttttctagatcctacagggtcacatttagtcatcagcctcaccacaaacgaa
tgtgtatacctaaaccgaaacactcaaaaggtccgaagtctgtcacgatggagaggccac
ttgattgaaagcataggatggaacaaattaatcggctctgagaccaacaccgggccgatt
ctggttggcaccagccatggaatcatctttgaagcggagatctctgcctcagagggcagt
ctgttcaacactaacccagaccagtacttcagacaggttcattccctggaggaggatggc
aagccagctccggtttgttgcctcgaggtagaacgtggcttggaatccaagtacttcatt
gtcgctaccacacgaaagcgccttttccagtttgtaggaaagctggcagagggatccgag
cagcaggggttcagctccatctttgcccagaaccaggatctcctacccagcttccaggag
tttccagtcaacatgggctacagtgagattacgttctacacgtccaagttgcgcagttcc
ccgaagtcctttgcatggatgatgggaaatggtgttttgtatggacagctggactatgtg
cggcccgactctctactcagtgatgttcaagtgtgggaatacacctcagacatcgattta
aactccgtcaagcccatctctatagtactcacccagtttcacttcctgctcctgctccca
gaccgcgtcaagagtatttgcactctgaacggacaggtagtgcatgaagaaaagtttttt
ccagaaaagttcggcagtctaaaaaagatgatcaaagatccaatcactgggctcgtgtgg
atctacaccgagaaagctgtgtttcgctaccacatccagagggaggcacgggacgtttgg
cagatgtacatgaacatgaataagtttgacctggctaaagagtactgcaaagacagacca
gaatgcctagacatggtgctggccaaagaggcagagcactgcttccaaaacaagcgctac
ctggagagtgccaaatgctacgctctcactcagaattactttgaggagattgcattgaag
ttcatcgaggccaagcaggaggaggccttgaaagagtttctgattaagaagctgaccaac
ctcaagcccaccgagaagactcagatcaccctgctggtcacctggctgacagaactctat
ctgaaccggctcggtcaactggaggccgatgacggcaagcaacacctctttctggagaca
cgtgaagagttccgcacctttcttaaaagctccaaacataaggactgcttctacaacaat
cgcaacaccatctatgacctgctcgctagtcacggcgacgtggacaacatggtgtatttc
tcagtcatcatgcaagattacgagcgcgtcatatctcattactgccagcatgatgactac
agtgcagccttggatgttctctccaaacactgcgatgacaagctcttctacaagttctcc
ccggtcctcatgcagcacattcccaaaaaggtggttgatgcatggattcaaatgggaaac
cggttggatcccaagaatctgatcccagcgctggtgaactacagccagatgggcagcatg
cagcagataaacgagaccatccggtacatggagttctgtgtgtatgagctggatgtcaaa
gacgaagccattcacaattacttactgtcactttatgccaaacacaaggcagacgctctg
ttgtggtacctcgaacaagcaggaacgcatgtctctgatatccactacgacttgaaatat
gccttgcgcctttgtgccgaacatgggtacctgcaggcctgtgtcttggtttataagatt
atggagctgtatgaggaagctgtggatctagctctacaagtggatgtagatttggccaag
acttgcgccgaccttccagaggatgacgaggagttgaggaagaagctgtggctgaagatt
gctcgtcatgtggttcaggaggagaaagatgtgaagaaggccatgaactgtctgtccagt
tgcaaccttctgaagattgaggacatcttgcctttctttccagattttgttacaatagac
cacttcaaggaggcaatttgcaactccttggaagagtacaaccaacacatcgaggagctg
aagcaagaaatggaggaggccacagaaagtgccaaacgcatccgtgaagacatccaggag
atgaggaacaagtacggtgtggtggagtcacaggaaaaatgtgccacttgcgagttcccc
ttgctcaacagacctttctatctcttcctgtgtggtcacatgttccattatgattgcctc
ttacaggaagtcatccctcacctctctgcctttaagcagaataaattagaggagcttcag
aagaagctggcagcaaccactcagaccaccaaatctaggcacaagcccaaagaggaggat
acggtcagcttaggcaagggccaaggaagcagagagcagatcaaatctgacattgatgat
atcatagcgtgtgagtgtgtctactgtggtgagctgatgatcaaatccattgacaagcct
ttcatagatccacacaagtttgatcaagagatgtccagctggctctga
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