Cyprinus carpio (common carp): 109077829
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Entry
109077829 CDS
T05134
Name
(RefSeq) spermatid perinuclear RNA-binding protein-like isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109077829
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109077829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
dsrm
DZF_N
Dicer_dsRBD
SGP
DUF6857
Motif
Other DBs
NCBI-GeneID:
109077829
NCBI-ProteinID:
XP_018948744
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All DBs
Position
8:complement(19238374..19265483)
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AA seq
674 aa
AA seq
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MAKHSTIYPSLRPWRPCRASYSTVERALKHVSDWMDQTQASQSNQSNSASTQEEETEASV
DELPEGSTNEDSSCSSTPSEGRVLCGVIRIGLVAKGLLIKDDMDLELVLMCREKPTETLL
CTVCDNLPQQIEKLTEDKYEVQSSIPEAAIVVCTKTEPKLTLKVTLSSPQMRDDCETEEQ
ESVESSEPADLLDRQRCLVALASLRHAKWFQARVNGLKSCVIVLRILRDMCNRVPAWEPL
KGWPLELICEKAIATCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCEKEPTNTLSSM
TDEEAEAITYNAQHALRLMAFGQIYKVLEMDPLPSSKPSQKFPWSDKEGLGLKRPYEDGL
LDDKDLIKKMKRNLRKAVLDSKAIDSNQPMNALMRLNQIRPGLQYKLLSQSGPVHAPVFT
MSVDVDGTVYEASGSSKKTAKLHVAVKVLQAMGYPTGFDTDLDSMSADEKSDGEGKSETS
THSSNNTSHSSDSSNTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISESGGSHDKRF
VMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAAGNKKKKIIPQSKGALAAAVS
AVAVQAARGRGRPTLTRGAFVSAAAAPGYVTPGFGAPYGYSAAAATPAYGLPKRMLLLPV
MKVPAYPVPHYSFF
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcactccaccatctacccttctctgaggccctggaggccgtgcagagcctcg
tactccactgtagagcgcgccctgaaacacgtgtctgattggatggaccaaactcaagcc
agccaatcaaatcaatcaaattcagcaagcacacaggaggaggagacggaggccagcgtg
gacgaattgccagaaggcagcacaaacgaggacagcagctgtagtagcactcccagtgaa
ggacgggtgttgtgtggagtgattaggatcggtctggtggccaaaggcctcctgattaaa
gatgacatggatctggagctggtgctcatgtgccgagagaaacccaccgagactctgctg
tgcaccgtctgtgacaacctcccgcagcagatcgagaagttgacagaggacaagtatgag
gtacagagctctattcccgaggcagccatcgtggtctgcactaagacagagcccaaactc
acgctgaaggtgacgctcagctccccgcagatgagagacgactgcgagacagaggagcaa
gagagcgttgagtcgagcgagccggcggacctgttggatagacagaggtgcctggtggcg
ttggcctctctgcgacatgccaaatggttccaggctagagttaacgggctaaagtcatgc
gtgatcgtcttgcgaatactgagagatatgtgcaatagagtcccggcgtgggaacctctg
aaaggatggcctttggagttaatatgtgagaaggccatcgccacgtgtaacagacctctg
ggagcaggagaggctctgcggcgggtcatggagtgtctcgcctctggcatactgcttcca
ggtggaccaggcctgcatgatccctgtgagaaggagccgacgaacaccttgtcgtccatg
acggatgaggaggcagaggccatcacgtacaacgcacagcatgctctgcggctcatggcc
tttgggcagatctataaggtcttagaaatggaccctctcccctcaagtaagccttcacag
aaattcccctggtcagataaagaaggtctagggctgaagagaccttatgaagatggtctg
ctggacgacaaagacctcatcaagaagatgaaacgcaacctgagaaaagcagttcttgac
agtaaagcaatagactcaaatcaacccatgaacgctctgatgcgcttgaaccagatccgg
ccggggctgcagtataaactgctgtcccagtcaggtccggttcacgcccccgtcttcacc
atgtctgtagacgtcgacggcaccgtttacgaagcctctggctcctctaagaagaccgcc
aagctgcacgtggctgtgaaggtgctacaggcgatgggttaccccacaggcttcgacaca
gacctggactccatgagtgcagatgagaagtcagacggggagggcaagagcgaaacgtcc
acacactcaagcaataacacatcacactcctcagacagctccaacacgttggaggtgcga
actcagggtcctattttgacggccagcgggaagaacccagtcatggagctgaatgagaaa
cgtcgcgggctgaagtacgagctcatctcagagagcggaggaagtcatgacaaacgcttc
gtcatggaggtggaagtggacgggcagaagtttcgtggcgcagggcccaataagaaagta
gccaaagccagcgctgccctcgcggctctagaaaaactcttctctgggcctaatgctgct
ggcaacaagaagaaaaaaataatccctcagagtaaaggggcattagctgctgctgtgtct
gcggtcgcggtccaggcagcacgagggcgaggaagacccaccctcacgcgaggagccttc
gtcagcgctgcagcagcacctggatacgtcacaccaggcttcggagccccatacgggtac
agcgcagcggccgccactcctgcatacggtttgcccaagagaatgcttctgttgcccgtc
atgaaagtgcccgcctaccccgttcctcactactctttcttttag
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