Cyprinus carpio (common carp): 109078130
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Entry
109078130 CDS
T05134
Name
(RefSeq) low-density lipoprotein receptor-related protein 5-like isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04150
mTOR signaling pathway
ccar04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109078130
04150 mTOR signaling pathway
109078130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109078130
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
109078130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
EGF_LRP2
Vgb_lyase
SGL
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
109078130
NCBI-ProteinID:
XP_042609383
Ensembl:
ENSCCRG00000041247
UniProt:
A0A9R0ASP3
LinkDB
All DBs
Position
B25:complement(8413672..8479941)
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AA seq
1617 aa
AA seq
DB search
MELKLGALAMEVLLLELLLCCTLTVIRGSPLLLFANRRDVRLVDAEAGRTESTVVVSDLE
DAAAVDFLFSEGLIFWTDVSEEAIKQTYYNLSTNSMKEATLGKGQTVVVSGLDSPDGLAC
DWLGRKLYWTDSETNRIEVANLDGTSRKVLFWQDLDQPRAIALNPAHRYMYWTDWGEEPR
IERAGMDGSSRQIIVQKQIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGTAREAIVEG
SLTHPFALTLYEKTLYWTDWQTRSIHACNKYTGEKRREILSGIYSPMDIQVLGQERQPNI
QTPCSERNGGCSHLCLLSPVPPFYSCACPTGVKLKEDGKTCRPGAEQVLLLARRTDLRRI
SLDLPDFTDIVLQVSDIRHAIAIDYDPVEGYVYWTDDEVRAIRRARIDGSDAQTLVTNEI
NHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRRILISENLDEPRAIVLDPINGYMYW
TDWGEMPKIERANLDGTDRVVLLNTSLGWPNGLAIDYVAGKLYWGDAKTDKIEVINVDGT
NRMTILEDKLPHIFGFTLLGEYIYWTDWQRRSIERVHIANATREVIVEQLPDLMGLKATK
VSETFGTNGCAENNGGCSHLCFHRPPGLSCACPMGLELLSDLRTCVVPEAFLLFTNRADI
RSISLGTNSNDVPIPLTGVKEVTALDFDVLENRIYWTDVITKTISRAFMNGSLVEPVIEF
GLDYPEGMAVDWMGRNLYWADTGTNRIEVARLDGQYRQVLVCKDLDNPRSLALDPASGYM
YWTEWGGRPRIARAHMDGSNIVTLVDKVGRANGLTIDFIDQRLYWTDLDTCMIESTNMQG
LQREIVADDLPHPFGLTQYRDYIYWTDWNLRSIERADKRSGLNRTVVQGHLEYVMDILVF
HSSRQDGANECSQNNGNCAHLCLASPSGAQCRCASHYTLEANGRNCSSPSSFLLFSQKSS
ISRMVLGEQSPDMILPIHVMKNLRAISFDPLEHLVYWVDGRQNIRRARDDGSQASTVMTP
TNLHPKQPHDLSLDPYSRTVYWTCETTNTINIHRMDGHVIGEVLKDDVDKPRAIVVNAEK
GYMYFTTVQDRSAKIEGASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDTDLKRIES
SDLSGANRIVLQDSNILQPVGLTVLGDHLYWIDKQQQMIECVDKLTGEKRTRIQGRLQYL
TGIHAVEYMEPEEYASHPCSRDNGGCSHICIAKGDGTPRCSCPMHLVLLQNLLSCGEPPT
CSSEQFTCATGEIDCIPMAWRCDGIAECADHSDEMNCPICSELQFQCDKGQCVDSQMRCN
GEPDCADGSDEQDCDTICMPNQFRCSNNQCILKKQQCDSFADCTDKSDELFCDLPLPPND
IPRHTSTIGPVIGIILSVFVMGGMCFVCQRVVCRHYKGPNGGFPHEYISGTPHVPLNFIA
PTNSQHGTFTGISCGKSMMSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTKGAFYPQML
NPPPSPATDRSLYNAEVFYSSNSPSTTRSYRPYLMRGVAPPTTPCSTDVCDSDYTTSRWK
SNKYYMDLNSDSDPYPPPPTPRSQYMSAEESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaagctgggagcgcttgcgatggaggttttattgctggaactgctgctttgt
tgtactctgacggtgattcgtggttctcccttgctgctcttcgccaaccgacgggacgtc
cggctggtggatgcagaggcgggccggacggagtccactgtagttgtcagcgatcttgag
gatgcggccgcagtggacttcctcttctcggagggcctgatattctggacagacgtcagt
gaagaggccatcaaacagacttactacaacctctctactaactctatgaaggaggccaca
ctgggcaaagggcagacggtggtggtgtcaggtctggattctcctgatggcttagcttgc
gactggctcggccgcaaactctactggacagactctgagacgaaccgcatcgaagtggcc
aacttggacggcacctctcgtaaggtgctcttctggcaagatctcgaccagcccagggcg
atagcgctaaacccagctcataggtacatgtattggactgactggggggaggagccaaga
atagaaagggcgggaatggacggcagcagtcgacaaatcattgtccagaagcaaatctac
tggcccaatggactgaccatcgacctcgaggagcagaaactctactgggcggatgccaag
ctcagcttcatccacagggccaacttggacggaacggctcgggaggccattgtggagggt
tccctcactcacccattcgccctcactctttatgaaaagactctttactggacagactgg
cagacccgatccatccacgcctgcaacaaatatactggagagaaacggagagaaattctc
agcggcatttactcgccgatggacatccaggtgctgggccaagagcggcagcccaacatt
caaactccatgcagtgaaagaaatggaggctgttcccacctgtgtctcctctctcctgtg
ccgcccttctatagctgtgcttgtccaacaggggttaaactcaaagaggatggaaagact
tgtcgaccaggggcggaacaggtgcttctactggctcgccgcactgaccttcggcggata
tccctggatttacctgacttcacggacatcgtcttacaagtcagtgacatccggcacgca
attgccatcgactatgacccagtggaaggatacgtctactggacggatgatgaggtgagg
gccatccgccgtgcccgaatagacggaagcgacgcccagactttggtcaccaatgagatc
aaccatcccgatggaattgcagtggactgggtggcgcgcaacctctactggacagacacc
ggcactgatcgcattgaggtgactagactcaacggcacttctcgacgcatcctcatatct
gagaacctggatgaaccacgagccatcgtgttagatcccataaacggatacatgtactgg
actgactggggagagatgcccaagatcgaacgagcaaacctggatggaactgacagggtt
gtgctgctcaacacctcccttggttggcccaatggtttggccattgactacgtcgcagga
aagctttactggggtgatgccaaaacggacaaaattgaggtcattaatgtggatggcact
aataggatgaccattctagaggacaaactacctcatatctttggttttacgctgctggga
gagtatatctactggacggattggcagaggaggagcatcgaaagagttcacatcgccaac
gccacacgtgaggtcatcgtcgagcagctccctgacctcatgggtctcaaagccacaaaa
gtctcggagacctttggcactaacggctgtgcagaaaacaacggcggctgcagtcacctg
tgtttccatcggcctccgggtctaagctgcgcctgccccatgggcttggagttgctgagt
gatctgcgcacttgtgtggttccagaagcgttcctgctcttcaccaaccgtgctgacata
cgcagcatctctctgggcaccaacagcaatgacgtgcccatcccgctcaccggggtcaag
gaggtcaccgcattggactttgatgttttggaaaacaggatctactggaccgatgtcatc
accaagactatcagcagagccttcatgaatggcagtttggtggaaccggtcattgagttt
ggcctggactatccagagggtatggctgtggactggatgggtcgaaacctctactgggct
gataccggcaccaaccgtatcgaagtggcccgtctggacggccagtaccgacaagtgctg
gtctgcaaagacctggataaccctcgctctcttgctctggatcctgccagtgggtacatg
tactggacagaatggggaggtcgacccaggatagctcgagctcacatggacggcagtaac
atcgtgactttggtggacaaagtgggccgagccaacggactcacaattgacttcatcgac
cagcgactctactggacagacctggacacctgcatgattgagtccacaaacatgcaaggt
ttgcagagagagatagtggctgacgatctccctcatccttttggcttgactcagtatcgc
gattacatctactggaccgactggaacctgcgcagcatcgagcgggccgacaaacgcagt
ggcttgaaccgaactgtggtgcaagggcacctggagtatgtcatggacatcctggttttc
cactcctccagacaagacggtgccaacgagtgttcgcagaacaacggcaactgcgcccac
ctctgcctggcatcaccctctggagcccagtgccgctgcgcttcccactacaccctggag
gcaaacggacgcaactgcagctcaccctctagcttcctgctcttcagccagaagagctcc
atcagtcgaatggtcctgggagaacagagtccagacatgattctacctatccacgttatg
aagaacttgcgcgccatcagctttgaccctctggaacacctggtctactgggtggatggc
cgacaaaacatccgcagggcccgggacgacggcagtcaggcgtccacagtgatgacccca
accaacctccacccaaagcagcctcatgacttgagtctggacccttacagtcgcaccgtc
tactggacctgcgagaccaccaacaccatcaacatccatcgcatggacggacatgtgatc
ggggaggtcctgaaggatgacgtggacaagccacgcgccatcgtggtgaacgctgagaaa
ggatacatgtatttcactactgtccaggatcgttcagctaaaatcgaaggtgcatctttg
gatgggacggagcgtgaatccctgttcacaaccggcttgatccgccccgttgcactggca
ttggacaacaagctcggcaaactgttctgggtggacacagacctgaagcggattgagagc
agtgacctgtccggggccaatcgtatcgttctccaggactccaacatccttcagcctgtc
ggtctgactgtgttgggtgatcacctgtactggatcgacaaacagcagcagatgatcgaa
tgtgtggataagctgaccggagagaagaggacccgcattcaggggcgactccagtacctg
accggcatccatgcggtggagtacatggagccagaggagtatgcatcccacccttgttcc
cgtgacaacggaggttgctcccacatctgcattgctaagggtgatgggacaccacgctgc
tcgtgtcccatgcacctagtgctgcttcaaaatctgctcagctgtggagagcctcccacc
tgctctagtgagcagttcacctgcgctactggcgagatcgactgcatccccatggcgtgg
cgctgtgacgggatcgcagagtgtgcagaccacagcgacgagatgaactgtcccatctgc
tccgaactccagtttcagtgtgacaaaggccaatgcgtggactctcagatgcgctgcaac
ggagaacctgactgcgcggacggctctgatgaacaggattgcgacaccatttgcatgcct
aatcagttccgatgtagcaacaaccagtgtattctgaagaaacagcagtgtgactccttc
gcagactgcacagacaaatctgacgagcttttctgcgatttacctttgccccccaacgac
attccacgtcacaccagcaccatcggccccgtcatcggcatcatcctctctgtctttgtg
atgggaggcatgtgttttgtgtgtcagagagtcgtgtgtcgccattacaagggccccaac
ggaggcttcccacacgagtacataagcgggacccctcacgtgcccctcaacttcatcgca
cccacaaattcacagcacggtacttttacaggtatttcctgtgggaagtccatgatgagc
tcagtgagtctcatgggcagcagcagcagtggggcacctctctacgacaggaaccatgtg
acgggagcttcatccagtagctcttccagcaccaaaggagctttttaccctcagatgctc
aaccctcctccatcaccagccacagatcgctcactctacaacgcagaagtcttttattca
tccaacagcccatcgacaaccaggtcttacaggccgtatttgatgcgaggggtcgcgccc
cccaccaccccctgcagcacagatgtgtgtgacagcgactacaccaccagccgctggaaa
agcaacaagtactacatggacctcaattcagactctgacccctaccctccaccccccacc
ccacgcagccagtacatgtcagcggaggagagctgccccccctcgccctccaccgaacgc
agctacttccacctgtgccccccgcccccctcgccctgcacggactcctcatga
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integrated database retrieval system
