Cyprinus carpio (common carp): 109078549
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Entry
109078549 CDS
T05134
Name
(RefSeq) hepatocyte nuclear factor 6-like isoform X1
KO
K08026
one cut domain, family member 1 (hepatocyte nuclear factor 6)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109078549
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
109078549
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
109078549
NCBI-ProteinID:
XP_042630910
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Position
A18:complement(9125446..9136240)
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AA seq
458 aa
AA seq
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MNAQLSMENIGDLHGVSHESAADLMTGDSAHHRSHRSSLSAHARSMGMASILDSGDYHHH
RPPEHPGLATHLHPAMSMACEAPPGMSMSSTYTTLTPLQSLPPISTVSDKFPHHHHHHHH
HHHHPHQRIPGNVSGSFTLMRDDRGLAPMNNLYSPYHKDVASMGQSLSPLSGSGLSGIHN
SQQGLPPYAHPGATMPAEKMLTPNGFEAHHPAMLARHGEQHMSASSASMVQINGIHHHPH
THLNAQGHGQVLGSTRELNHSSAPGSQLNNGSSSGQMEEVNTKEVAQRITTELKRYSIPQ
AIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAGERT
IACKRKEQEHGKSERGSISKKPRLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLEL
TTVSNFFMNARRRSLDKWLDDCSSNSANSSSSSTCTKA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccagctgtcgatggagaacattggcgatctgcacggagtgagccatgaaagc
gcggcggatctcatgaccggagacagcgctcatcacaggagccatcggagcagtctgtca
gcccatgcgcgctccatgggcatggcatcaatcctggacagcggcgactatcatcaccac
cggcccccggagcaccccgggctcgccacgcacctgcacccggccatgagcatggcgtgc
gaggctccccccgggatgagcatgagcagcacttacaccaccctcaccccgctgcagtcc
ttaccgcccatctccaccgtctccgacaaattcccgcaccaccatcatcaccaccaccac
caccatcatcacccgcaccaaaggatcccggggaacgtcagcgggagcttcaccttgatg
agggacgataggggtctggccccgatgaacaacctctactctccctaccacaaggatgtg
gccagcatgggacagagcctatcacccctgtctggatccggactgagcggcattcacaac
tcccagcaggggctgccgccctacgcgcaccccggggccaccatgcccgccgagaagatg
ctcacacccaacggattcgaggcacaccaccccgcgatgttggctcgacacggggagcag
cacatgagcgcgtcttcggcgagtatggtgcagatcaacggcatccaccatcatccgcac
acccatctcaacgcccagggtcacgggcaggtgctgggctccactcgggagctgaaccac
tcatccgcgcccggatcgcagctcaacaacggcagcagttcgggacagatggaagaggtc
aataccaaagaagtggcacagaggatcaccacggaactgaaaagatacagcatcccgcag
gccatcttcgcacagagggtactgtgccgctcgcaagggacgctttcggacctgctccgg
aaccctaagccctggagcaaacttaagtctggccgggaaaccttccgcaggatgtggaaa
tggttgcaggagcctgagttccagagaatgtccgcgctcaggctcgcaggtgagagaaca
atagcatgcaagagaaaggagcaggagcatggtaaaagcgagcgagggagcatctccaag
aagccccggctggtcttcactgatgtccagcgtcggactttacatgcaatattcaaagag
aacaagcgcccatccaaagagttacaaatcaccatctctcagcagctgggcctggagctc
accaccgtcagcaacttcttcatgaacgcacgtcgacggagcctcgataagtggctggat
gactgcagctcaaactcggccaactcctcctcctccagcacttgtaccaaagcatga
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