Cyprinus carpio (common carp): 109078632
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Entry
109078632 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: HEAT repeat-containing protein 5A
KO
K24814
HEAT repeat-containing protein 5
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109078632
Membrane trafficking [BR:
ccar04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
109078632
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laa1_Sip1_HTR5
HEAT
UTP20_C
Motif
Other DBs
NCBI-GeneID:
109078632
NCBI-ProteinID:
XP_042630520
Ensembl:
ENSCCRG00000025920
UniProt:
A0A9R0BDC8
LinkDB
All DBs
Position
A17:28479277..28501002
Genome browser
AA seq
1932 aa
AA seq
DB search
MDLCGQANVKQNQKHLLRAADDEDRSCNKCVLMFYFVQSQGRCEIMLCIERILKGLGVSA
VSCHRDIIYKAARPCLTDRSMGVRCAATKCLLELQREAVFLWSTELENVATLCFRAFEGS
NYDVRVAVSKLLGTFISIGTSPRQAIAPRPGSKRNSLEEVMELLSSGFLRGGAGLLRASG
DMLKGTSSVSRDVRVGITQTCVVFVSILGGAWLENHFSCLLSLFMVWVSHAQGDAITQQM
LLSCRCCVSFILRATVGTLLGEKAQIAAAKRICQLISKQKRVYAALHEGNMETRVSPAEV
AASQHVLVCALFELGSLLQDFAPLPHPLLQDTSIGMLDTVISVLLHPSASARLAAAWCLR
CVAVGMPAQVAVLLDRCAERLNALKSCPEAVAGYSAAIAALLGAIQLCPLGVSHSKGKVM
TLAEDLLRSATQQNSRISIQRTRGCWLLLSALSTLGPTVMEHHLPRLLLLWKCAFPLSVK
GVENELRRGDSFTWQVTLEGRAGALCALKSLVVHCKDLLTDDVLSRLFPLLSCAVACSIS
ELPSLIXILWNQIKNAATVFRLRVYEILTMLQPKRYEESFGMVLKQLLNDLTGPEITTCA
ELNLLPSLCYRQDLALLGPALQDVGQHYIEEQLHCGGSGGGTLEYDPFTIFEKAQEVPTP
LPPGSALAAAAVKLFGVIFPHLGIQQKAQILEQFCEFVRQLKGARQQTVQIHVAAAFCCT
LKCLASSRRELGSDEVQRPALSLLLGALEGPNPLLRCMAAEGLARLVQVLNDPNFTVSIT
LMSFDKLKTARDAITRTGHALALGAVYRYLGGISSPQYLSTCVGVLFTLSQDSTSPEVQM
WSLHALSMVVDLAGPLYHSHLEASFNLVLRLLLSTPHTHVEVQQSLGRCFNALITSMGPD
LQGEGAGVCAVRTSCLVGCAVMQDSQDCLVQAQAISCLQQLHMFAPGFVNLASLVPSLCE
VLLDYSLLINLCSSYLSLRRAVVACLRQLAQREAVEVSEHAVALVKELPRRDNTQLDVTI
KEVGLEGALFSLLDRESDPCLCRDIQETLVHMMSSAAEGNLATGCKLCKDVLSASADSAA
AAAVETQQEEDGDRYDDSSAFHAKSESSGPFSNLRWSTRVFSMECVCRIIAQCENGNSAH
FNMALAQEQHLHESADFLVLHLADLIRMAFMAATDHSDQLRLAGLQTLLVIIRKFSNVPE
PEFPGHVILEQYQANVGAALRPAFHVDAPPNVTAKACQVCSAWIASGVISDLRDLRRVHQ
LLASSLAKVQVGREVSSQLYNESTFTMETLAVLKAWAEVYITAVQGSRQRESPGSLLQQQ
NDEAGTTGPAGAGLLKLVQTDLATLSRLWLAALQDHALLTLPSQYSSQLPSTGGSFYTAE
TVEQARPHYYSAWATILHATALWLNSTGFIMVDEGPANLSRPVTPTSMGQSTSLSSVKSP
EDVNTDRLHLILGISVEFLCSPHSGDQMENIDSCLQALQALLEVPWPRSKVGNDQALGVE
MLSVLHRLIVTRESPNIQLAVLELVRQIVCAAQEHVKEKRHSAEADDGAAEKETVPEFGE
GRDTDGLVPFKSLVFGALELCLCTLVRKLPQLSPKLAGSPTGRGGQTCSLSNTDCRLVTS
ALVILSELPSICSPEGSVSVLPTVLYLLLGVLREAVKGSVGAESGQLVPGILQALRTVLT
SPMSRAEKSRGAWTELLRCALHTLLESWHTDKMEPGVDXVTMLTSLTIFLLYARADVTTV
EPLQTRCIQIFRASLESKDPVVLSRSYQLLVSFLFQGPAPVARPFILALGGCLVSQLQEV
EKSRPQGPAELQAVQDAIRALEALVFAADETHCPQLVAVLLPILISLLLDENALASAPAA
SRSLHEFALGDLMRIGPQHSAVFRALMASAPHMKARLEAAVKGNQENMNTKAQTTRVISK
NMPSIQLKFNFL
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atggatctgtgtgggcaggccaatgtgaaacagaaccagaagcacctgttgagagcagct
gacgacgaagaccgtagctgtaataaatgtgtgcttatgttttattttgtccagtctcag
ggccgctgtgagatcatgctgtgtattgagaggattctgaagggtttaggtgtgagtgct
gtgtcctgtcacagagacatcatctataaagctgctcgcccatgtctcaccgaccgctcc
atgggtgtgcgctgtgctgccacaaagtgtcttctggagctccagagagaggctgtcttc
ctgtggtccacagagctggagaatgtggccactctttgtttccgggccttcgagggctca
aactatgatgtccgagtcgctgtctcaaaactgcttggcacttttattagcatcggcact
agccccagacaggccatagctccgaggccaggctccaagcgcaactccctggaggaggtg
atggagctgctgagttctggtttcctgcggggtggagccggcctcctgcgggccagtgga
gacatgttgaaaggaaccagctcagtcagcagagacgtgcgcgtgggcatcacacagaca
tgtgtggtgtttgtgtccattctgggtggcgcatggctggagaaccacttctcctgtctt
ctttctcttttcatggtgtgggtgtctcacgcacagggtgacgcaataacccagcagatg
ctgttgtcctgccgctgctgtgtctccttcatactgcgggccactgttggcactttgctg
ggggagaaggcccaaatcgcagctgccaagaggatctgtcaattgatcagcaaacagaag
agggtttatgctgctcttcatgaggggaacatggagacacgtgtgagccctgcggaagtc
gcagctagtcagcatgtgcttgtgtgtgcactctttgagctgggcagtctgctacaggac
tttgctccactgccgcacccactgctgcaggacaccagcataggaatgttggacactgtg
atctctgttcttcttcaccccagcgcatctgctcggctggccgccgcctggtgcctgcgg
tgtgttgccgtagggatgcctgctcaggtggcagtgttgctagaccgctgtgcagagagg
ctaaatgccctgaagtcatgcccagaggctgtggcagggtacagtgctgccatcgcagct
ctgctgggagccatacagctctgtccgctaggagtatcacactctaagggcaaggtgatg
accttggcagaagatctgctgcgctctgcaactcagcagaacagcagaatctccatccaa
cgcactcgaggatgttggctgctgctcagtgccctctccacactgggaccgactgtaatg
gagcatcacttacctcgattgctgttgctatggaaatgtgccttcccactgtctgtgaag
ggtgtggagaatgagctgcggcgtggagactctttcacctggcaggtgaccctggagggg
cgagcaggagcactgtgcgcactgaagagtctagtggtgcactgcaaagacctgctgacc
gatgatgtcttaagtcgtttgtttcctctcttgtcctgtgcagtggcctgctcaatcagt
gagctgccctctctcatttaaatcctatggaaccagatcaaaaatgcagccactgtcttt
agattgagagtgtatgagatcctcacaatgcttcagcctaaaagatatgaagagagcttt
ggcatggtgttgaagcagctgctgaacgatctgaccgggccagaaatcacaacatgtgct
gagctgaacctgctgccctccctgtgctacagacaagacctggcactgctgggccctgca
ctgcaggatgtgggtcagcactacatagaggaacagctccattgtggtggttcaggaggt
gggacattagaatatgacccatttaccatctttgagaaagcccaggaagttcctacccct
ctccctccaggctctgctttagcagcagcagctgtcaagctgtttggggtgattttcccc
cacctgggaattcagcagaaggctcagatcctagagcagttctgtgagtttgtgcgtcag
cttaaaggagcccggcagcagactgttcaaatccatgtagctgctgctttctgctgcact
ttgaagtgtttggcatcaagtcggagggaactggggtcagacgaggttcaaagaccagca
ctgtctctcctattaggggcgctagagggcccaaaccctctcttgcgctgcatggctgcg
gagggtttagccaggcttgtgcaagttcttaatgaccccaatttcaccgtttccatcaca
cttatgagctttgacaaactgaagacagcgagggatgccatcacacgcacaggtcatgct
ttggcactcggcgctgtataccgttacctgggtgggataagctcccctcagtaccttagt
acctgcgttggggtcctgttcaccctgtcccaggacagcacctcacctgaagttcagatg
tggtctctccacgctctttccatggttgtggatctagctggtcctttgtaccacagtcac
ttggaggctagttttaatctggtgctacgtttgctgctctcaacgccacacacgcatgtg
gaggtacagcaaagcttgggccgctgctttaacgccctcatcacctccatggggccggat
ctgcaaggtgagggtgcaggtgtgtgtgcagtgaggacctcgtgtttggtgggctgtgct
gtgatgcaggacagtcaggactgtctggtccaggcccaggcgatctcttgcctccagcag
ctgcacatgtttgcgccaggctttgtcaatctggccagcctggtgcccagcctctgtgaa
gtcttattggattattctttgttgataaacctgtgcagttcgtacctgtctctgaggcgt
gcggttgtggcctgcctgagacagctggctcagagggaagcagtggaggtatcggagcac
gcagttgctctggttaaagagctaccacgcagagacaacacacaattggatgtcactatt
aaggaggtgggattggagggagctttgttcagtctgctggacagggagtctgacccgtgc
ctgtgccgagacattcaggagacgctagtccacatgatgagctcggctgctgagggtaac
ctggccactggctgtaaactctgcaaagacgtgctctctgcctctgcagactccgctgca
gctgctgctgtagagacgcaacaggaggaggatggagatcgatatgatgactcctctgca
ttccacgcaaagtctgaatccagcggccccttcagtaacctgcgctggtccactcgtgtg
ttttccatggagtgtgtgtgtcgtataatagcacagtgtgagaacggaaacagtgctcac
ttcaacatggcacttgctcaagaacagcatttacatgaatctgcagatttcctggttctc
cacttggcggacctcatccgcatggcgttcatggcagccacagaccacagcgatcagctc
cgactggctggtttacaaacactgctggtcattatccggaaattctccaatgtgccagag
cctgagttccctggacatgtcattctggaacagtatcaagccaatgttggagctgcactc
agacctgccttccatgtggacgcccctccgaatgtgactgccaaagcctgccaggtttgc
agtgcatggatcgccagtggggtcatcagcgacctgcgtgacctgagaagggtacatcag
cttctggcttcctctctcgccaaagttcaggtggggagagaagtttccagtcagctctat
aatgaaagcaccttcaccatggagacgctggctgtgctcaaagcctgggcagaggtgtat
atcacagcggtacagggctccaggcagagagagagtccaggcagccttcttcagcagcag
aatgatgaggctgggactacaggtccagcaggggctggtttgctcaaactggtccagact
gatcttgcaaccctgagccgcctgtggctggctgcccttcaggaccatgccctgctcacc
ctgccctcacaatactccagtcaactcccctccacaggtggctcattttacactgcagag
acggtggaacaggcccgtccacattattacagtgcctgggctaccattctccacgctact
gctctctggctcaacagcactggattcatcatggtggacgagggacctgccaacctctcc
agaccggtcacacccacctccatgggccagtctacctcattgagtagtgtcaaatctcca
gaagacgtcaacactgaccgcctccacctaatcctgggaatcagtgtggagtttttgtgt
tctcctcactctggagaccaaatggaaaacatcgattcttgtcttcaggctctgcaggcc
ttattggaggtgccttggccccgttccaaagtgggcaatgatcaggctctgggtgtggag
atgctcagcgttctacacaggctcatagtcactcgggaatctcccaacattcaactggct
gtgctggaactggtgcgacagattgtttgtgctgctcaggagcatgtcaaagagaaacgc
cacagtgcagaggctgatgatggtgcagcagagaaggaaactgttcctgagtttggtgag
gggcgggacactgacggcctggtgccttttaagtctcttgtttttggagcactggagctg
tgtctctgcacacttgtgagaaagcttccgcagctcagccccaaactggctggcagcccc
actgggcggggagggcagacctgctccctcagcaacactgactgtagactcgtcacatct
gctctggtcatcctctcagaactgccctccatctgttcaccagagggcagtgtgtcagtg
ctgcccacagtgctctatctgctgctgggggtgttgagagaggcggtgaagggctctgtt
ggagcagagagtggacagctggtaccaggcatcctgcaggccttgcgcactgttctcacc
tctcccatgagcagagctgagaagagtcgtggggcctggactgaactgctgcgatgtgca
ctgcacacgctcttggagtcttggcacacagataaaatggagcctggagtagattaggtc
accatgttgacatctctcaccatcttcctgctgtacgccagggctgacgtgaccacagtg
gagcccctgcagacacgctgcatccagatattcagagccagtctggaatcgaaggacccc
gtggtgctgagcagaagttatcagttgctggtatcatttttattccaaggtccagcacca
gtagccaggccatttattctagctctgggtggatgtctggtgtcacaactgcaggaggtt
gaaaagagtcgtccgcaaggcccagcagagctacaggccgtgcaagatgcaatccgagcc
ctggaagcactagtgtttgctgctgatgaaactcactgtccacaactggtggctgtgctg
ttgcccatcctcatctctctcctgctagatgagaatgctttggcatcggctccggcagcc
tctcgctcactgcacgagtttgccttgggagacctcatgcgcatcggcccccagcactcg
gctgtcttcagagcgctgatggcctccgccccgcacatgaaagccaggctggaggcagcc
gtcaagggcaaccaggagaacatgaacactaaggcacaaacaactcgggtcattagcaaa
aacatgccaagcattcaactgaagttcaatttcctgtga
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