Cyprinus carpio (common carp): 109079055
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Entry
109079055 CDS
T05134
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccar03036
]
109079055 (mms19)
03400 DNA repair and recombination proteins [BR:
ccar03400
]
109079055 (mms19)
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109079055 (mms19)
DNA repair and recombination proteins [BR:
ccar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
109079055 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_2
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
109079055
NCBI-ProteinID:
XP_042623031
UniProt:
A0A9R0B7C6
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All DBs
Position
A12:1751115..1773346
Genome browser
AA seq
1016 aa
AA seq
DB search
MAADNSVLLGLVEEFVSGQVDSKAAETSTGVKNGQFTILQLVEALGVSLSSSQPQTRGRG
VQLLSQVLQECYSSLSEREVEVLLAFYENRLKDHYVIIPHVLQGLKALTKCSVLPPGSAV
SVLKSIFQDIHVQSLMLAERSCVYNILISLMESKEEELKGLGSDFIFGFVQSVDGERDPR
NLLLAFQVARNIIQRGYDLGKFVEELFEVMSCYFPIDFSPPPSDPRGITQEELVLSLRAV
LTGTSQFAEFLLPLIIEKLDSDIQSAKVDSLQTLAACGLTYSHKELAEFLPGLWSSIRRE
VSQTASERVESAGLSALSALVSCLSRSVLNSDSEDVLQVFLSLVLKDCQHHLCEPDLKLV
WPSAKLLQAAAGASYRASLIVSAAIIPALLEQYNNRTQCAHRRTLLEVLQGFVQPTALSR
PADGEDSVLVAFQQSLCGVVFSALTESSAGLQVTATRVLSALGQQPGLMAQTDVEKAVDH
LSRLILEEDDPKLSSAVVECSGSLAHLHPKAFISRLIPRLKEEILSGQSDAAVRQRCVTA
LASVSSLPSVVQESAPVLLQVLASAHTGSCGFSVEEVAAVCISLQKIAEHARDSEEIGRF
FHDIIIPHLLGLCLQAALQTRDAGHSSPLTDKAVLSAVVPVMSTACAALRSESASRMAAQ
AVSLFLDGDVSFLPENAFPSKIQLLQSQAESGGLSQLVCLLMACVCSLPRSVEIPEIDRL
LLQLEDLSCTCTHLFSFTSAAKCFAGLVNKRPAGEALDAVLERVMKRISVELENTSSGQR
TQAFTLLLWVSKALLLRYHPLSTALTDQLFALLSDPALGSQAADGFGVLMSDCLDVLNRG
CHADVRIMYRQRFFAENSTKLVQGFNSAEQEKKSCYLKALSHIVSNLPRQVQLTELPALL
PLLLEALSCADQAVQLSTLSCLQPVLLEPPEALRNQLEALFSRLLALTTSPAMKVRIASL
QCVHALSRLPEHTVLPFRARVLKALAVPLDDKKRLVRKEAVAARAEWFLLGSPGGR
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggataacagtgtgttgctgggtttagtggaagaattcgtgtctggacaggtt
gacagcaaggccgcagaaacctctacaggtgtcaagaacggacaattcacgattctccag
ctggttgaagcactgggggtgagtctgagcagctctcagcctcagacgcgtggccgggga
gttcagctcctgtctcaggtcctgcaggaatgctacagcagcttatccgagagagaggtg
gaggtcctgctagctttctatgaaaacagactgaaggatcactatgtgatcataccacat
gttctgcaggggctcaaggctttgacgaaatgctcggttctgcctcctggttcagcggtg
tccgttttgaaatccatcttccaggatattcatgttcagtccttgatgcttgcagagcga
tcatgtgtttacaacatccttatcagtctaatggagtccaaagaggaggagctcaaaggt
ttgggttcagacttcatattcggatttgtgcagtcagtagacggagaacgagatccacgc
aacctcctgctggccttccaggtggccagaaacatcattcagaggggttatgatctcggt
aaatttgtggaggaactgtttgaagtgatgtcctgttattttcctatagacttcagccct
ccccccagtgaccctcgagggatcacgcaggaagagcttgttctctctcttcgggctgtt
cttactgggacgtctcagtttgctgagtttcttttaccgctgatcatcgagaagctggac
tcagatattcagagtgccaaagtggactccctgcagacactggctgcctgcggtctgacg
tatagccataaagagctggcagaattccttccaggcctttggagctcaatacggagggag
gtgtcgcagacggccagtgagcgagtggaatccgccggtctgtcagctctcagcgcactg
gtgtcctgtctttctcgttccgtgctcaattcagactctgaggacgtgctgcaggtgttc
ctaagcctcgtcctcaaagactgtcagcaccatctctgcgagccagacctcaagcttgtg
tggcccagcgccaaactcctgcaggccgccgccggagcctcatacagagcgagtctgata
gtgtcagccgccatcatacctgccctcctggagcagtataataacaggacgcagtgtgct
caccggcgcaccctgctggaggttctgcagggtttcgtgcagcccaccgcactcagccgg
cctgcagatggagaggacagtgtattggttgcgttccagcagtctttgtgtggcgtggtt
ttctctgcgctgacggagtctagcgctggtctccaggtcacagccacacgggtgctctct
gcactgggacagcagcccggtttgatggctcagacagatgtggagaaagctgttgatcat
ttgtccagactcattctggaggaagacgatcctaaattgagttcggctgtggtggagtgt
tcaggctctctggctcatctgcatcccaaagcctttatttccaggctgattcctcgactg
aaagaagagatcctgtcaggtcagtctgatgcagctgtacgtcagcggtgtgtgacggcg
ttagcgtctgtgtcgtctctgcccagtgtggtgcaggaaagcgcccccgttctgctacag
gtgctagcttcagcccacacaggtagctgtggtttctctgtggaggaagtggccgctgtc
tgcatcagtctgcagaagatagcagagcatgcgcgtgactcggaggagatcggacggttc
ttccatgacatcatcattccgcaccttctaggactctgcttacaggcggcactgcagact
cgggacgctggtcacagcagtccactcacagataaggctgttctgtctgcagtagttcct
gtcatgagcacagcctgtgctgcgctacgatcagaatcagcgtcccgcatggccgcccag
gctgtttctctcttcctggatggagacgtgtcttttctgccagagaatgccttcccttcc
aaaatccagttgctccagagccaggcggagtctggaggtctgtctcagctggtgtgtctg
ctgatggcctgcgtctgctcgcttccacgcagcgtggagattcctgagatagaccggctt
ctgctgcagctggaggatctgagctgtacctgtacacacctgttctccttcacctctgca
gccaaatgcttcgctggcttggtcaacaagaggccggcaggtgaagctctagacgcggtg
ctggagagagtgatgaagaggatcagcgtggagctggagaacacttcctctggccagcgg
acacaagcgttcactctgctgctctgggtgtctaaagccctgctcttacggtaccatccg
ctatcgacagccctgaccgaccagctcttcgctctgttgagtgacccggcgttaggatct
caggcggctgacggtttcggcgtcctcatgagcgactgtctggacgtcctcaatcgcggt
tgccacgctgacgtgcgcattatgtaccgtcagcgctttttcgctgaaaactcgaccaaa
ctagttcaaggcttcaactcggcagagcaggagaagaagtcttgttatttgaaggcactg
tcccacattgtcagtaaccttcccagacaggtccagctcaccgagcttcctgcgttgctg
ccgctgctgttggaagcgctgtcgtgtgcggatcaagcggtccagctgtccactctgtcc
tgcctgcagccggtgctgctggagccaccggaggccctcaggaaccagctggaggcgctg
ttctcccgcctgctggccctcaccaccagccctgctatgaaagtgagaattgcgtcgctg
cagtgtgttcatgcgctctctcgcctgcctgaacatacggttctgccgttccgtgccaga
gtcctgaaagctctcgctgttcctctggatgacaaaaagcggctggtgaggaaggaggcg
gtggcggctcgagcagaatggtttttgttaggaagccccgggggaagatga
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