Cyprinus carpio (common carp): 109079160
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Entry
109079160 CDS
T05134
Symbol
rbm12bb
Name
(RefSeq) RNA binding motif protein 12Bb
KO
K24526
RNA-binding protein 12
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109079160 (rbm12bb)
Spliceosome [BR:
ccar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109079160 (rbm12bb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
109079160
NCBI-ProteinID:
XP_042596650
UniProt:
A0A8C1YEF6
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Position
B16:complement(11171325..11179852)
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AA seq
635 aa
AA seq
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MAVVIRLQGLRITAGSEDIRNFFTGLRIPDGGVHIVGGELEEAFIIFASDEDARRAMTRS
GGCIKGSPVNLLLSSKSEMQSVLEESTRRPELKSRGMYKEVVKSPSAERGPLPFNKDPRL
DIRRPDHQEMRNRPSLSSFSETRHQREGSTTERDEVYLKLTGMPFSATKDNVYNFFSGLQ
IEDIMFLRNPRGQFNGQSIVRLATKQDAVEGLKRDREYIGPRYIQVTRCSEEQWLAEGGL
VKPDNRKRASLERARSRSPISYKSRSRSPSHEEYCVMFENLPYMVEKRDLRVLLHPVSLK
DDQIIIFAQKKDDRTRSAVVVFRSLTDYCAGLAHNKEMLMNKVVYVSPISKEKMVTLLES
SVDSRDEGKESRRSAEAPQSQRNNPDSQLRCLYVRNLPFDVRKVEIMDFFHGYPLSEDRV
VLLRDERGAGLGEALVIFQSEKEAMTAQSLNGQRFLGSEVMLKCITIGQMQKFGVNDQLM
DSPQERNFQRTEAFNDGPCFSNTPMPRDDFEMPPNLRQGYGGHDRFEPNFGRNDAFGPGP
DGNGRQCYGSPDQQLDGPTCLKLVNLPSQIRIDEIYDFFYGYRVIPGSASLLYDRNGAPK
RSATVAFETHREALTALQELNGRPIGTRKIQILFV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgattacagggactcagaatcacggctggttctgaggacattcgc
aatttcttcactgggctcagaatacctgatggtggggttcatatagttggtggggagctt
gaggaagctttcataatatttgcatctgacgaagatgcgaggcgagcgatgacgcgctca
gggggctgcattaagggctctcccgtcaacttgctcctgagtagcaagtcagaaatgcag
agtgttctcgaggaaagcactagaaggcctgagttaaaaagcaggggcatgtacaaggag
gttgtcaaaagtccttctgcggaacgaggtcctctaccattcaataaggacccaagatta
gacatacgaaggccggatcatcaagagatgaggaacaggccttctctatcttcattcagt
gagacacgacaccagagagaaggaagcacaacagagagagatgaggtttatctgaaattg
acagggatgccattctctgcgacaaaggacaatgtctataactttttcagtgggttacag
attgaagacattatgtttttgagaaaccccagaggacagttcaacggccagagtattgtg
cgccttgctaccaaacaggatgcagttgaaggtctgaagagggatcgagaatacattgga
ccgcggtatatccaagtaacaagatgctccgaggagcagtggctggcagaaggaggtctc
gttaaaccggacaatcggaaaagagcatccttagagcgagcgagatctcgatctcccatt
tcctacaagtcaagatcacgatcgccctctcatgaagaatactgtgtcatgtttgagaac
ttgccttacatggttgaaaagagagatttgagggtgttacttcatccggtttctttgaaa
gatgatcagattattatctttgcccaaaaaaaggatgataggaccagatcggctgttgtg
gtgtttagaagtctcacagactattgtgctggtttggctcataataaggaaatgttgatg
aacaaggtagtgtacgtgtcacccatctccaaggagaaaatggtcaccttgttggaatcg
tctgttgactcaagggacgagggaaaagagtcgagacgttccgcagaagcaccccagtct
caacgaaacaatcctgactcgcagttgaggtgtctctacgtgcgcaatctcccatttgac
gttcgtaaggtggagatcatggacttctttcatggatatccgctctcagaggatagggtt
gtcttattgcgggatgaaagaggtgctgggctcggtgaggctttggtgatctttcaatct
gagaaggaggccatgacggcacagtccctaaacggacagcggtttcttggatctgaagtc
atgcttaagtgcataacgattggccagatgcagaagtttggcgtcaatgaccagttgatg
gatagcccacaagaaaggaacttccagagaaccgaagctttcaacgatggtccttgtttt
tcgaacaccccgatgccccgagatgattttgagatgccgcctaatttgcgccagggttat
ggaggtcatgatcgctttgagcctaattttggccgcaatgatgcatttgggccgggaccg
gatggtaatggacgtcagtgttacggatcacctgaccaacaacttgacggtccgacttgt
ctgaaattggtcaatctaccctctcagataaggatcgatgagatttatgacttcttctat
ggatacagagtgatcccaggttctgcctcattgctgtatgatagaaatggagctcccaaa
cgttcagcaacggtagctttcgaaacccacagagaggcgctcactgctcttcaagaatta
aatggacgaccaattggcaccagaaaaattcagattttatttgtgtag
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