KEGG   Cyprinus carpio (common carp): 109079199
Entry
109079199         CDS       T05134                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03030  DNA replication
ccar03410  Base excision repair
ccar03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109079199
   03410 Base excision repair
    109079199
   03420 Nucleotide excision repair
    109079199
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccar03032]
    109079199
   03400 DNA repair and recombination proteins [BR:ccar03400]
    109079199
Enzymes [BR:ccar01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     109079199
DNA replication proteins [BR:ccar03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    109079199
DNA repair and recombination proteins [BR:ccar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      109079199
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 Closter_coat
Other DBs
NCBI-GeneID: 109079199
NCBI-ProteinID: XP_042613195
Ensembl: ENSCCRG00000020565
UniProt: A0A9R0AWT4
LinkDB
Position
A5:8822938..8850988
AA seq 2277 aa
CLLLFRDDALALSAVKRLERSQFTDGMDECFGFERMKEPGEKTGCLINMHPVRNVRHSTR
VFCKXKYLFVDYYFIQEDGNRFKVYVSPHKPYFYIATKKNCEREVISFLSKKFQGKVAKL
EGVPKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVKREISPAVRKNREREKSNDAYTSML
SSVVTEDEDGTSKKMTEQLDNIVDMREYDVPYHVRVSIDLKIHVAHWYNVLYRGSAYPPE
IVCRDDLVERPDPVVLVFDIETTKLPLKFPDAETDQIMMISYMIDGQGNMICNILCVLLI
EDFEFTPKPEYEGPFTVFNEPDEASLIQRFFEHIHETKPNXFVTYNGDFFDWPFVETRAA
QLGLSMHQEIGFQKDNQGEYKASQAIHMDCLRWVKRDSYLPVGSHNLKAAAKAKLGYDPV
ELDPEEMCRMATEEPQTLATYSVSDAVATYYLYIKYVHPFIFALCTIIPMEPDGVLRKGS
GTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVLDSETYVGGHVEALESGVFRSDIP
CRFKMNPAAFDFLIQRVERTLRHAIEEEEKIPLEQVTNFNEVCEEIKRKLISLKEVPNRI
ECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDLNKPGANCQRRMTWQWRGEIMP
ASRSEFHRIQQQLESEKFPPLFPNGPPRAFHVLNREEQARHEKKRLGDYCRKAYKKVHLT
RLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSTAQDNGDAVEVKRCKNM
EILYESLQLAHKCILNSFYGCVMRKGARWYSMEMAGIVCFTGANIITQARELIEQIGRPL
ELDTDGIWCVLPNTFPENFVIKSTNEKKAKVTISYPGAMLNIMVKEGFTNHQYQELVDPA
SLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNEDGSLAELKGFEVKRRG
ELQLIKIFQPSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKCCSCLLFSAANMPDAEL
FELISENRSMSRKLEDYGEQKSTSISTTKCPAEFLCDQMVKDAGLSCRYVIFRKPEGSPV
TERAIPLAIFQAEESVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGSAIQKIITIPA
ALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQTLPAGETPDME
DFGAPQRPVQPAILISTKRKRISQGEDSQAESQEQELTQSWREILGPPPAIGACREELLV
WLRYHKKKWELQLRQRKERRKRRRLIDGESQPTGGGVIRGGPTTGLGSFLRRTARSILDM
PWQIVQIAETSHPGFYKLWAVIGSDLHCMKLNIPRVFYVNQKVPKQEEGANCKKVNRILP
RSGVVYYLYQYAVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQLGCMCMVNK
QVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHKALFGLFIPSQRK
ASIFVLDTVRSNQMPNLSSLYGAERTALLEKTTEELLPPEKHLFEVRAENDVKAIYRALQ
RILLNYKEERRAPTLIAVQSNWELRRLAAGMTVLEEFPVVPVHVIDEINYSVVDWQRHGA
RHMIIHYLNLDSCLSQAFDMARYYHLPVGNLPQDISIFGSDLFLARHLRKHNHLLWLSPT
ARPDLGGKEADDSRLVMESDERGSMEINSHGCYSTVCVELDIQSLAVNTILQSQHVNDME
GGASMGVSFDVIQHASLEEMMSGNQGANTVASYDETALCSNTFRILKSMVVGWVREITQY
HNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKIFLQLVAEFKRLGSSVIYGNFN
RLILCTKKRRIDDAIAYVEYITNSIHSKEIFHSLSITFSRCWEFLLWMDPTNFGGVKGKL
PSSLLYGEHDNEKKKKKDVEEEDGSEEEEEDEENQGEDEEQDGEDDVEDLIESNWNIMQY
LPQTASCQKYFLMIISAYIAAVYHSMKQELRRNAPGATPIKRRGATQASQQPTGDVSALP
GLITFSQEYVSSELTQNFFTITQKIQKKVSSTRSVTLPSEMFPVLPGSHLPLNNPALEFI
KYVCQVLSLDTNIVNQVNKLKRDLLRLVDVGEFSEDAQFCDPCKLYVLPEVICHHCNFCR
DLDLCKDPAVSQDGSVLPQWFCSNCQAQYDTESIEIALVEALQKKLMSYTLQDLQCAKCK
GVKEANMLLYCSCAGDFSLSFTTKSFTEQVEVFRNIAAHYNMSFLLETIDWVLSMNA
NT seq 6834 nt   +upstreamnt  +downstreamnt
tgtctgttgctttttagggatgatgcattggctttgtccgctgtcaagcggctggagcgc
agtcagttcactgatgggatggatgagtgctttgggtttgaacggatgaaggagcctggg
gagaaaacaggatgtctgatcaacatgcacccggtaaggaatgtcagacattcaacacgg
gttttttgcaaataaaaatatttatttgtggactattactttatacaggaggatggaaac
agattcaaggtatatgtgtcccctcacaagccgtatttctacatagccactaaaaagaac
tgtgaaagagaggttatctccttcctgtcaaaaaagttccagggaaaagtggcaaagctt
gaaggtgtcccaaaggaagacttagatctgcctaatcacctggtgggcctgaagaggaat
tatattaaactgtcttttaacacggtggatgaccttgttaaagtgaaaagggagatctca
cctgctgtccgcaagaacagagagagagagaagtccaatgacgcctataccagcatgttg
tccagcgtagtgacagaggacgaagatggcacttcgaagaaaatgactgagcagcttgac
aacatcgtagacatgcgggaatatgacgtgccttatcatgtccgcgtttctattgacctg
aagattcatgtggctcactggtacaatgtgctgtacagaggaagtgcctatcctcctgag
attgtgtgcagggatgatcttgtggaaagacctgatccagtagtgttggtattcgatatt
gagaccactaaactccctctgaagtttcctgatgctgaaacagaccagatcatgatgata
tcgtatatgatagatgggcagggtaacatgatttgtaatatactttgtgtacttcttatt
gaggactttgaattcaccccaaaacctgaatacgagggccccttcactgtatttaatgaa
cctgatgaagcctctcttattcagagattctttgaacacatccatgagaccaagccgaac
nattttgtcacttacaatggagatttctttgactggccatttgtagaaaccagagcagcc
cagcttggcttgagtatgcatcaggagatcggcttccagaaggacaatcagggggaatat
aaagccagccaggctattcacatggactgcctcaggtgggtgaagagagacagttacctg
cctgtaggaagtcataacctcaaggctgcagcgaaagctaagttaggctatgaccctgta
gagctggacccagaggagatgtgccgtatggctactgaagaaccacagactctggccacc
tattcagtgtctgacgctgtggccacatactacctttacattaaatatgttcatcccttc
atttttgccctctgcactataattccgatggaacccgatggggttttgcggaagggctcc
ggtaccctgtgcgaggccttgctgatggttcaggccttccatgccaacattgtcttccca
aacaagcaggagcaggtctttaacaaactcacagatgatggtcatgtacttgactctgag
acttatgttggcggccacgtcgaggctctagagtctggtgtgtttcgtagtgatataccc
tgccgctttaaaatgaatcctgcagcatttgacttcttgattcagagggtggagcgtact
ctccgtcatgcaattgaggaagaggagaagattccccttgagcaggtcaccaactttaat
gaggtgtgtgaggaaatcaagaggaagcttatctctctaaaggaagtgcctaatagaatc
gagtgtcctcttatttaccatctggatgtgggggccatgtaccccaacatcattctcacc
aacagactacagccctctgccatggtggatgaggcgacctgtgctgcctgtgatttaaat
aaacctggtgcaaactgtcagcgcagaatgacttggcagtggagaggagagatcatgcct
gcgagtagaagtgagtttcatcgcattcagcaacaactggagtccgagaagtttccccct
ctctttcctaatggtccaccacgtgctttccatgtgctcaacagagaagagcaagctcgg
catgagaagaagcgcttgggagactactgtcgaaaagcttataagaaggttcacctgacc
agactggaggagagagtcacaaccatttgccagagagagaactctttttatgttgacact
gttcgagccttcagagaccgtcgatatgagttcaaaggactccacaaggtgtggaagaag
aagctgtctacagcgcaggataatggggatgcagtggaggtgaagcgctgcaagaacatg
gagattctatatgagtctctgcagcttgcgcacaagtgcatcctaaactccttctacgga
tgtgtcatgagaaaaggagcacgttggtactcgatggagatggcagggattgtctgtttc
accggtgccaacattatcacacaggccagagaactcattgagcagatcgggaggcctctg
gagttggacactgatggtatctggtgtgttcttcccaacacctttcctgagaactttgtc
ataaaatccaccaatgagaagaaggcaaaggtgaccatcagttatccaggagccatgctg
aacatcatggtcaaggagggcttcacgaatcatcagtatcaagagctggtggacccagca
tctttaacatatgagaccagagctgagaacagtatcttctttgaagttgatgggccgtac
ttggctatgatcctgcctgcctctaaagaagaagggaaaaaactaaagaaaaggtatgcc
gtgtttaatgaggacgggtcactggctgagctgaagggctttgaggtgaaaagaagagga
gaacttcaactcattaagatcttccagccttctgtgtttgaggccttcctgaaaggcaca
actctagaagaggtttatgcctctgtggctaaagtggctgactactggcttgatgtgctc
tacagcaagtgttgttcttgtcttctgttttcggctgctaacatgccagatgcagagttg
tttgagctgatttctgaaaaccgctccatgtcccgaaaactggaagattatggagaacag
aagtccacctccatcagcacaaccaagtgtcctgccgagttcctttgcgatcagatggtg
aaggacgccggcctcagctgtcgctatgtcatctttcgcaaaccggagggttcgcctgtc
actgaaagggcgatccctctggccatttttcaggctgaagagagtgttaaaaagcatttc
ctacgcaaatggctgaagatgcccagtctccatgaccttgatattagatctattctggac
tggagttactacattgagcgtttgggcagtgccatacagaagatcatcactatccctgca
gctctacaacaggtgaaaaatccagtgccccgagtacggcatccagactggctgcataag
aagcttctggaaaagaatgacatctacaagcaaaagaagatcagtgagctctttaccagt
gagggaaagagacaggtggcccatcaaacattaccagcaggtgagactcctgatatggag
gactttggtgctcctcagcgccctgtgcagcccgccatactcatcagcacaaagaggaag
aggatatctcaaggagaggacagccaggctgagtctcaagagcaagaacttacacagtct
tggagagaaatactggggccaccaccagctatcggcgcctgccgggaggaacttcttgtc
tggttgcgctaccataagaaaaaatgggagctgcagcttcgtcagaggaaagaacggcgg
aagcgacggcgtttaattgatggtgaatctcagccaactggcggtggcgtaatccgtggt
ggaccgacaacagggctaggcagcttcctgcgaagaactgcccgcagtattctagacatg
ccctggcaaattgtacagattgctgaaaccagtcacccaggcttttataagctgtgggcg
gtcattggcagtgacctgcactgcatgaagctcaacatcccacgagtgttttatgtcaat
cagaaagtgcccaagcaagaagagggagctaattgcaaaaaggtgaaccggatacttcca
cgctctggtgtggtgtattatctgtaccagtatgctgttcctgaggacatgtaccaggaa
cacatcaatgagatcaatgctgacctctcagctcctgatattgagggtgtctatgagaca
caggttccactgctgttccgtgctctggtccagttgggctgcatgtgtatggtcaataaa
caggtggtcagagacctggctggcagagaggctgataccttcgacctggagcacctagag
atgagatccctggcccagttcagctacctcgaaccaggcagtgtaaggcacatctacctg
taccatcacagtcagggccataaggctctctttggcctcttcataccatcccaacgcaaa
gccagcatctttgttcttgacacggtacgcagtaatcagatgccgaaccttagttcgttg
tacggagcagagcgcacagcactcctggagaagaccacagaggagctgctgccacctgag
aaacatctgtttgaagtgcgtgctgaaaacgatgtcaaagccatctaccgcgcactgcag
cgcattctcctcaactacaaggaggagcggcgcgctccgacactgattgctgttcagtct
aactgggagctgcggcgtctggcagctggcatgactgtattagaggagttcccagtggtg
ccggttcatgttattgatgagataaactacagtgtagtggactggcaacgacacggagct
cgccacatgataatacactacctgaacctggacagctgcctctcacaggcttttgatatg
gccaggtactatcacctgcctgtgggaaatctgcctcaggacatttctatatttgggtca
gatctatttcttgcacgtcatctgagaaagcacaaccacttgttgtggctgtcacctacg
gcacgtccggacctcggggggaaagaggctgatgacagcagactggtgatggagagtgat
gagagaggctccatggagatcaatagccatggctgctactccacagtgtgtgtggagttg
gatattcagagtttggcagtaaacaccattctacagtcccagcatgttaatgacatggaa
ggcggggccagcatgggtgtcagctttgatgtcattcagcatgcatctctggaggaaatg
atgtcagggaatcagggggcaaacacagtggccagctatgacgagacagcgctctgctcc
aacacattcaggattctgaagagtatggtggtcggttgggtccgagagatcacacagtat
cataacgtctacgctgataaccaggtgatgcatttttaccggtggttgcgatcacccagt
tctctgctgtacgacccggccctgcaccgcacactcctcaacatgatgaagaagatcttc
ctgcaacttgtggcagagtttaagcgcctgggatcatctgtgatctatggaaacttcaac
cgtctcatcctctgcactaagaaacggcgcattgacgacgccattgcatacgtggagtac
atcactaacagtatccattcaaaggagatcttccactctctgtccatcacattctcacgc
tgttgggagtttctgctgtggatggatccaactaactttggaggagtgaagggaaagctg
ccctctagccttctttatggagagcatgacaatgaaaagaagaaaaagaaagatgtagag
gaggaggatggaagtgaggaggaggaagaagatgaagaaaaccaaggggaggatgaagaa
caggatggggaagatgatgtagaagacttgattgaaagtaactggaacatcatgcagtac
cttcctcagacagcatcctgtcagaaatactttctcatgatcatttcagcctacattgca
gctgtctatcacagcatgaaacaagagcttcggcgaaacgcccctggtgctactcccatt
aagagacgaggagcaacccaagcatcccagcagccaactggggatgtcagtgcacttcct
ggtttgattacattctctcaggagtatgtgtccagtgaactcacacaaaacttcttcacc
atcactcagaagattcagaagaaagtgtcaagcactcgtagtgttacgctcccatctgag
atgtttcctgttcttcctggttctcacttgcccctcaacaacccagctctggagtttatt
aaatacgtctgccaggtgctctctctggacacaaacattgtcaatcaggtgaacaaactg
aagcgagatcttttgcgactggtggatgttggagaattttcggaggatgcccagttctgt
gacccctgcaagttatacgtcctgccagaggtcatctgccaccactgtaacttctgtcgt
gaccttgacctctgcaaagaccctgcagtttcccaggatggttcagttcttcctcagtgg
ttctgctctaactgtcaggcccagtacgacacagagtccatagaaatcgccctggtggag
gcgctccagaagaagctcatgagttacacactacaagacctgcaatgtgccaaatgcaaa
ggagtgaaggaagcaaacatgctgctgtactgtagctgtgctggagatttcagcctcagc
ttcaccacaaagagcttcactgagcaagtggaagtcttccggaacattgcagcccactat
aacatgagcttcctgttagagaccattgactgggtccttagtatgaatgcatag

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