Cyprinus carpio (common carp): 109079221
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Entry
109079221 CDS
T05134
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109079221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109079221
03110 Chaperones and folding catalysts [BR:
ccar03110
]
109079221
04121 Ubiquitin system [BR:
ccar04121
]
109079221
Enzymes [BR:
ccar01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
109079221
Spliceosome [BR:
ccar03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109079221
Complex C
U4/U6.U5 tri-SnRNP related factors
109079221
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
109079221
Chaperones and folding catalysts [BR:
ccar03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
109079221
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
U-box type E3
109079221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
V-set_CD47
U-box
Motif
Other DBs
NCBI-GeneID:
109079221
NCBI-ProteinID:
XP_042579378
Ensembl:
ENSCCRG00000021711
UniProt:
A0A9Q9W9N2
LinkDB
All DBs
Position
B5:complement(30259564..30294477)
Genome browser
AA seq
521 aa
AA seq
DB search
MGKRQHQKDKMYITCTEYTHFYGGKKSEIPRANFRRLPFDHCSLSLQPFEYPMCTVDGVV
FDLMSIVPWIKKFGTNPITGEKLEAKSLIKLNFSKNNEGKYHCPVLYTVFTNNSHIVANK
VTGNVFSYEAVEQLNIKTKSYKDLLTDEPFTRQDLITLQDHHKSGIFKILNASVLTSISH
NVKNNMKGPSTHDLKSTNMETRETLAELYRDYKGDELLASTMKEPEAKKTDKLNAAHYST
GRVSASFTSTAMAPATTHEADAISDDTVRYQYVKKKGYVRLHTNKGDVNVELHCDKVPKA
GENFIKLCKKGYYDGTIFHRSIRNFMIQGGDPTGTGTGGESYWGKPFKDEFRPNLSHTGR
GILSMANSGPNTNKSQFFITFRSCTYLDRKHTVFGRVVGGLETLTAMENVESDPKTDKPK
SEIKLLSTSVFVDPYEEADAQIAAEREKEAQKQEEERAQTSASVNKAKTEDKPKTFRPGV
GKYINTAATKHSHPDGEKPSTSEAPAKRPKGRTGFGDFSSW
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaagacagcatcaaaaagataagatgtacatcacatgtacagaatacactcat
ttctatggagggaagaaatcagaaatcccacgagccaatttcagacgtctgccctttgat
cactgcagtttgtctcttcagccctttgagtatcccatgtgcacagtggatggggtggtt
tttgacctaatgagcattgtgccttggattaagaagtttggtaccaaccccataacagga
gagaaacttgaggctaaatccctcatcaagctcaatttcagcaaaaacaatgaagggaag
taccattgtcctgtgctctacacagtgttcacaaacaactcccacatcgttgccaacaaa
gtcacaggaaatgttttctcttatgaggcagtggaacagctcaacatcaagacaaagagt
tataaagacctattgacagatgaaccattcactcgtcaggatctcatcacactacaggat
caccacaaatctgggatattcaaaattctcaatgcttctgttctgacctccatctcacac
aatgtgaaaaacaatatgaaaggtccctcgacccatgatctgaaaagcacaaacatggag
acgcgagaaacacttgcagagctctacagggactataaaggagatgagctgttggcctcc
actatgaaagagccagaagccaaaaaaacagacaagctcaatgctgctcactattccact
ggaagagtgtctgcctccttcacttctacagctatggctccagccaccacccatgaagca
gatgctatttctgatgataccgttcgctaccagtatgttaagaagaaaggctatgtccgc
ctgcacacaaacaaaggagacgtgaatgtggagttgcactgtgataaggtccccaaggct
ggagaaaactttattaaactgtgtaagaaaggatattatgacggcacaatattccaccgc
tctattagaaatttcatgattcaaggaggagaccctacagggactggtacaggaggagag
tcttactgggggaagccattcaaggacgagttcaggcccaatctgtctcacacgggtcgt
ggtattctgagcatggctaactcaggacccaacacaaataaatcccagttctttataaca
tttcgctcatgcacatacctggaccggaaacacactgtgtttggaagagtggttggtggt
ttggagaccctcacagcgatggagaatgttgaaagcgatccgaagacagacaaacccaag
tctgagataaagctgctgagcacttcagtatttgtggacccgtatgaggaagccgatgca
cagattgcagccgagagagagaaggaagcacagaaacaggaggaagagagagcgcaaact
tctgcttcagtcaacaaggcaaaaacagaggacaagcctaaaaccttcagaccaggagtg
ggcaaatacatcaacacagctgccacgaaacattcccacccagatggtgaaaaaccctcc
actagtgaagctcctgccaagagacccaaaggcagaacaggttttggagacttcagttcc
tggtag
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