Cyprinus carpio (common carp): 109079837
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Entry
109079837 CDS
T05134
Name
(RefSeq) splicing factor 1-like
KO
K13095
splicing factor 1
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109079837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109079837
Spliceosome [BR:
ccar03041
]
Complex A
Other components
Complex A specific factors
109079837
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
109079837
NCBI-ProteinID:
XP_042583259
UniProt:
A0A9Q9WH16
LinkDB
All DBs
Position
B7:13433785..13442265
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AA seq
665 aa
AA seq
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MATGANATPLGKLHPSIGAKRGFESGPGAGLMPPPGPAVSFPLQNLQQPQLSNPGFSQFP
GAVSSGLSNPVGVGLTLPSLAGSGDFGQKKRKRSRWSSETPDQKTIIPGMPTVIPPGLTQ
DQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKKLE
EERHSLITEMVGLNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKN
IEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNIL
KQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSITNTTVCTKCGGAG
HISSDCKFTSSFAQRPGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHSNPPPSGP
RPAGPNNNQPPPNRPPWMNSGPTDNRSFHGMHQGPGGPHSFPPPMPNMGGPPMPPNPNGM
PPPWMQPPPPPMSQGPAPPGHPMGLLPPPMGMMPPPPPPPNSQPPPPPSGPLPPWQQQAP
PPPPTSSMATSTPLPWQQNTATTSTPATGNLPPWQQPQQTATSATQPPPPMGTPSMVPPP
PGVQPPLPPGAPPPPPPPPPGSAGMLYAPPPPPPPMDPNFVTMMGIPGMPPYGMPPAPPP
PPPQS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggagccaacgcaaccccgctggggaagctgcacccgagtatcggcgctaag
cgaggctttgagtctggccccggcgcggggttaatgccaccgcccgggcctgcggtgtct
ttcccgctgcagaacttacagcaaccgcagttatcaaacccaggcttctcccagttcccc
ggagccgtgagttctgggctctcaaacccagtcggagtgggactgacgttaccgtctctg
gcggggagtggagattttggccagaagaaacggaaaaggagtcgctggagcagcgagacc
cctgaccagaagaccattatcccgggcatgcccaccgtgatccctcccggtctgactcag
gaccaggagcgagcttatatagtccaactgcagatcgaagacctgacacgtaaactgcgt
acaggagacctgggaatccctgttaaccctgaggacagatctccatctcctgagcccatc
tacaacagtgaggggaagaggcttaatacacgtgaatatcggacacgtaagaaactggag
gaagagaggcattctctcattacagagatggtgggactgaaccctgaattcaaaccccct
gctgactacaaaccaccagctactcgtgtcagtgacaaggtaatgattcctcaggatgag
tatccagagatcaactttgttgggcttttgattgggccacgtggaaacactctgaaaaac
attgagaaggagtgctgtgctaagatcatgattcgtggtaaaggctcagtaaaggaggga
aaggtgggccgtaaggatggacagatgcttccaggagaagatgaacctcttcatgcactg
gtcactgctaacaccatggagaatgtcaagaaagctgtagagcagattcgtaatatcctc
aagcagggcattgagacccctgaagaccagaacgacctgagaaagatgcagctaagggag
ctggcacgactcaatggcactctgagagaagatgataacagaatcttacgcccgtggcag
agcactgagcctcgcagcatcacaaacacaactgtctgtacaaagtgtggtggagcaggt
cacatctcatcagactgcaagtttaccagttcctttgcacaacgacccggtgaaccaccc
cagtctgctcaggataaggcccgtatggataaagagtacttgtctctcatggcagagcta
ggagaggctccagtcccttcctccggtgggggccacagcaatcctccccctagtggacct
cgtcctgcaggacccaacaataaccagccaccaccaaatcgtcctccttggatgaattca
ggccctactgataacaggagtttccatggcatgcaccagggtcctggtggccctcacagc
ttccctccaccaatgccaaacatgggtggccctcctatgccaccaaaccccaatggaatg
cctccaccctggatgcagccgccgcctcctccaatgagccaaggcccagcaccacccgga
caccccatgggtttattgcctccacccatgggtatgatgcccccgcctccacctcccccc
aacagccaaccaccacctccaccctcaggacctctgccaccttggcaacagcaggcccct
cccccaccacccaccagcagcatggcaaccagcactccattgccttggcaacagaataca
gccaccacatccacccctgccactggaaacctgccaccctggcaacagcctcagcagacg
gccacctcagccactcagccccctccgcccatgggcaccccctctatggtgccgcctcca
cctggggtccaacccccacttcctcctggtgcgccacctcctccaccgccccctccacct
ggctcagcaggcatgttgtacgcacctcctcccccacccccacccatggaccctaacttt
gtgaccatgatggggattcccggcatgccaccgtacgggatgccccctgcacctccaccg
cctccaccccagagttaa
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