Cyprinus carpio (common carp): 109079909
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Entry
109079909 CDS
T05134
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
109079909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109079909
03036 Chromosome and associated proteins [BR:
ccar03036
]
109079909
Transcription factors [BR:
ccar03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
109079909
Chromosome and associated proteins [BR:
ccar03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
109079909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
109079909
NCBI-ProteinID:
XP_042593765
Ensembl:
ENSCCRG00000034188
UniProt:
A0A9Q9X280
LinkDB
All DBs
Position
B14:5612984..5669933
Genome browser
AA seq
2040 aa
AA seq
DB search
MTTDICRSNKLNTLVTKLHEFLGHSPDDESIDSQDISNGKMAASDSNIPEERMNEPGCSS
EMSKPSSSRSKRKPSFVTKHTAVDESECVSEGAGEHGTDDSMQSGLDISKLPQGTVVVKP
EPVADEAKDEFRGPEFRSRGSKVKEDGARKRPDEQLKEIFNCTACGQQVNHFQRDSVFQH
PALHVLICKSCFKYYMSDDISKDEDGMDEQCRWCAEGGNLMCCDYCSNAFCKKCVLRNLG
RKELSEIMNEESKWHCYVCRPEPLQDFVKTCEKVLLNLESSYRKPKGDGDKTKREDRKHK
HSKREKSAVNGQDYASDGAGSLSFSCKTLTVPKELVKKTKKLIETTNGLNRTFVQFLQHT
SKGSEVSAVSYRHLKAFKSVLADLKKAHSALEESLEEEFESKGLKFQNGEEQRPAQTDHP
VVNSHHADPAPVREDGLDCETKDQNPVVEEDENQQDSNSADVEMKESLPPSPEEPQDQSE
ESEAKEQEMAENPDFEESSVPAGEASLDKDIVSVPPSVPEELFEMVESLAVKKEDRDDGN
STASSDWKSTSNAKVVESNKSLTKLGRKLVVKLTPVPLKITIKRDKSKEQLPSEDLPKEG
QDSRRSTRMKTTPLRKSPEAKSKRKPRSSTAKEELSAAVKEPCDSDSDEVPEVLQTAALK
PSSDESQPENSSGKGTKKKGASSSAEKAKPKRKLDMVSSDSEQSGKSSTANKRRAKKKKG
RESDSSSHNSDLEKQIKNLSKIGTGKKTSKGVKKEESESSKEGKKGPKRSFERKRRSQRE
KAKTKEELSSSDEEQEEEEPAANSDEDSDQQKIKPILESVMASIDGFHQSSGDEMELKAE
SSRVVDDDDDPENRIAKRMLLAQIKANYSSGADSSSDDENADKEDGDSPKKGKDGAKKQD
ESEKEEEDETSDSDSGSDVDVKKGGRRHRLLSKKLTLSEGDSDDETTVKNKKDTKKRGRR
KVDSDDSADSDFEQSRSSSSDASALSEDVSEDGDEDKSNKRKTRSSNKAAKDRERSYKKE
KKKRRRIKVQDSSSSGKSGGEEDGEDEGDEKGTPKNRKKIRKIIKDDKLRTETRDALKEE
EERRKRIAERERLREKLRETIVVEESSQVTCPITTKLVLDEDEETKEPLVQVHRNLVTKL
KPHQVDGVQFMWDCCCESVRKVEKSSGSGCILAHCMGLGKTLQVVTFLHTLLLCEKLNFS
TALVVCPLNTVLNWLNEFEKWQEGLKDEESLEVTELATVKRPQERAYALQRWQEDGGVMI
IGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHVLKNEASAVSKAMNSIQT
RRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLTDVRVM
KKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLAIRLTPIQCKLYRYYLDHFTGVGSA
LESGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMEEFIASETEESSM
SLTSEDEKPKRKKKRGKGKEQSSDKSDSDDLEVIKEWNTSSRGGNPEGRNRAEPVEEVRV
SNSGPGSPSPDWYKEFVTEADSEILEHSGKMVLLFEILRMAEELEEKVLVFSQSLISLDL
IEDFLELAGRAKEEGKLSPYKGEGKWFRNIDYYRLDGSTNAMTRKKWAEDFNDTSNVRGR
LFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQVKTVFVYRFLAQGTM
EEKIYDRQVAKQSLSFRVVDQQQIERHFTMNELTELYAFEPDLLDDPSEKKSKRATPMLP
KDPFLAELLHSYKDHIVGYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLSMRFNQP
SYSQMGMGAGPNSYFPFNVAALASMSNQQLEELINQGRQKVMEAANALKSVPREPLEDII
GQVWKENPSLPEAQVQSMAVGRQAGYEMEMKHREAVYRDVLGKQQTLMMYVQKVIANRKV
QEQQLAMARQGLLLNQLAMQNGLTGPINQMDLLGLYQQLGALQGLPSSQLGKNPGPSKGL
NT seq
6123 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacatctgcaggtctaataagttaaatacattggtgactaaacttcatgag
ttcttgggtcattctccggacgacgaaagcattgattctcaagacatttccaatggtaaa
atggctgcgagtgactcaaacatccctgaagagagaatgaatgagcctggttgctcctca
gaaatgtccaaaccctcatcttcacgctcaaagaggaaaccttcatttgtgaccaagcac
acagctgtagacgagtctgaatgtgtgagtgagggtgcgggagaacacggcacagatgac
agcatgcagagcggtctggatatcagcaagctgccgcaaggcacagtggtggtcaagccc
gagccggttgctgatgaagctaaagatgaattccgcggcccggagtttcgtagcagagga
agtaaagtgaaagaggacggtgctcggaaacgtcccgacgagcagctcaaggagattttt
aattgcacagcatgtggacagcaagtcaatcactttcagagggattctgtctttcaacat
cccgcactgcatgttcttatctgcaagtcatgtttcaaatattatatgagtgacgatatc
agcaaggatgaagatggaatggatgagcaatgcaggtggtgcgcagagggtggtaatctg
atgtgctgtgactactgcagcaatgccttctgcaagaagtgcgttttgaggaaccttgga
cgaaaagagctgtctgaaatcatgaatgaagaaagcaaatggcactgctatgtgtgccgc
ccagagccgctgcaggactttgttaaaacctgtgagaaggttttgctcaatctggagtcg
tcttatagaaagcccaagggagacggtgacaagacgaagcgtgaagatcgtaaacacaag
catagcaagcgagaaaaatctgctgtgaatggacaggattacgcctccgacggagcggga
tccttatccttttcctgtaagacgttaacagttccgaaagagctcgtcaagaagaccaaa
aaactcatcgagaccacaaacggtttgaatcgtactttcgtacagttcctccagcacacg
tcaaaaggcagtgaagttagcgctgtcagttatagacacttaaaggccttcaaatcagtt
ttggctgatctgaaaaaggcccactcggctctggaggagtcacttgaagaagaatttgaa
tcgaaaggtctcaagtttcaaaacggagaggagcaaagaccagcacaaacagatcatccg
gttgttaactcgcaccacgctgaccctgctcctgtcagagaggatggattggattgcgag
accaaggaccaaaatcctgtggtagaggaggatgaaaaccagcaggacagtaactcagct
gatgttgaaatgaaggagagccttccaccctctccagaagaaccgcaggaccagtctgaa
gaaagtgaagctaaagagcaagaaatggcagagaaccctgactttgaggaaagctcagtg
ccagcaggtgaagcgtctcttgataaagacatcgtgtctgttccaccgtctgtcccagag
gagctctttgagatggtcgagagtcttgcagtaaagaaagaagaccgtgacgatggcaac
tcgaccgcctccagtgattggaaatcaacgtccaacgccaaggtggtggaatccaataag
agccttacaaaactgggaagaaaacttgttgtcaaactaacacccgttcctcttaaaatc
accataaaacgagataagagcaaagaacagttgccttcagaagacttgccaaaggagggt
caagatagccgacgctccaccaggatgaagaccacaccactgcgcaagtcgccagaggcg
aagagcaaacgcaaaccgaggtcatcaacggctaaagaagagctcagcgccgcagtgaag
gagccgtgtgattcagactcagatgaggtccctgaggtcctgcagacggctgccttgaag
cccagctctgatgagagccaacccgagaactcttctggaaaaggcaccaaaaagaaggga
gcttccagctctgccgagaaagcgaagccaaagcgtaaactcgacatggtctcctcggat
tcagagcagagcggcaagtcatcaacggcaaacaaaaggagggccaaaaaaaagaagggc
agagaatcggactcctcgagccacaactctgaccttgagaaacagatcaagaacctgtcc
aagatcgggactgggaaaaaaacatccaaaggtgtcaaaaaggaagagagtgaatccagt
aaagagggcaagaaaggccctaaaaggtcattcgagaggaaacgaaggtcacagagagaa
aaggctaaaaccaaggaggagttgtcctccagtgatgaagagcaggaggaggaggagccg
gccgctaactcggacgaagacagcgatcagcagaagattaaaccaattcttgagtccgtg
atggctagtattgatggtttccatcagtcatcaggtgatgaaatggaattgaaggctgaa
tcctctcgggtggtggatgatgacgatgatccggagaatagaattgccaaaaggatgctt
ctggcgcagatcaaagccaactattcatctggagctgacagctcatctgatgatgaaaac
gcagacaaagaggacggggattcaccaaagaaaggaaaagatggtgctaagaagcaagac
gaaagtgaaaaagaggaagaggatgaaacctcggactcggactcgggctcggacgttgac
gtgaagaaaggtggacgcagacaccgtttgttgagtaagaagttgactctaagcgaggga
gactctgatgacgagaccacagtcaaaaacaagaaagacaccaaaaagagaggcaggcgg
aaagtggacagcgacgactctgcggactcggactttgagcagtcgcgctccagctccagt
gatgcgtcagcgctcagtgaggatgtgagtgaagacggcgatgaagacaagagcaataaa
cgcaaaacacggtcgtccaataaagctgccaaggaccgcgagagaagttacaagaaagag
aagaagaaacgacgtcgcattaaggttcaagactcctcgtccagtggcaagagtggaggg
gaggaggatggagaagatgaaggagatgagaaaggaacgcccaaaaatcgcaagaagatc
cgcaagatcattaaagatgacaagctgcggacggagacccgggatgcgctgaaggaggaa
gaggagaggaggaagcgcattgctgagagggagcggctgagggagaaactgcgagagact
atcgtggtggaggagtcatcgcaggtcacgtgtcccatcaccacaaagctggtgctggat
gaggacgaggagaccaaggaaccattagtgcaggttcacaggaacctggtgaccaaactc
aaaccccatcaggtggatggagtgcagttcatgtgggactgctgctgtgagtcggtgagg
aaggtggagaagtcttctggctccggctgtattctggcccactgcatggggctgggaaaa
actctccaggtggtgacgtttctccacactttgctgctgtgtgagaagctgaacttcagc
acagctctggtggtgtgtcctctcaacactgtgctcaactggctcaatgagtttgagaag
tggcaagaaggcctgaaggacgaggagagtttagaggtgacggagctggccacagtgaag
aggcctcaggagagagcgtacgctctacagcgctggcaggaggatggcggcgtcatgatc
ataggctatgagatgtaccgcaacctcacgcaaggacgaaacatcaagagcaagaagctg
aaggaaaccttccagaaaactctggtggatccaggtccggattttgtcatctgtgacgag
ggtcacgtgctgaagaacgaagcgtctgcggtctccaaagccatgaactccatccagacc
cgtcggcgagtggtgctgacaggaaccccgctgcagaacaacctgatcgagtatcactgt
atggtgaacttcatcaaggagaacctgctgggatcagtgaaggagttcagaaaccgcttc
atcaaccccatccagaacggccagtgcgccgactccacgctcactgatgtccgagtcatg
aagaagcgcgcacacatcctctacgagatgctggcaggatgcgtccagagaagagactac
actgccctcacaaaattcctgccaccaaaacacgagtatgtgttggcgatacggttaaca
cccattcagtgcaagctttaccgatactacctggatcacttcacaggtgtcggttctgcc
ttggagagtggaagaggccgcgccgggaccaaactcttccaggatttccagatgctcagc
agaatctggacccatccgtggtgcctccagctggactatatcagtaaagaaaacaaggga
tacttcgacgaggacagtatggaggagttcatagcctcagagacagaggagtcctccatg
agtttgacctctgaagatgagaagcccaaaagaaagaagaagcgaggcaaagggaaagag
cagagctcagacaagtccgacagcgatgacctggaagtgattaaggagtggaacaccagc
tctcgtggaggaaaccctgaggggcgcaacagagcagagcctgtggaggaggttcgggtg
tcgaactcaggtcctggcagcccatcacctgactggtacaaagagtttgtgaccgaggca
gattctgaaatactggagcattctgggaaaatggtgcttctttttgagatcctccgcatg
gctgaagaattggaagagaaagtgttggtgttcagccagtctctcatttctctggacctc
attgaagatttcctggagctggcaggcagagccaaagaggaagggaagctttcgccgtac
aaaggtgagggcaagtggttcagaaacattgactactatcgtctagatggttcaacgaat
gccatgaccaggaagaaatgggcagaggacttcaatgacaccagtaatgttcggggtcga
ttgttcctcatctcaaccagagctggttctcttgggatcaacttggtagctgcaaacagg
gtcataatttttgatgcctcatggaacccatcctacgacattcagagtattttcagagtc
tatcgctttggccaagtgaagactgtgtttgtctacaggtttttggctcagggaaccatg
gaggagaagatctatgaccggcaggtcgccaaacagtctctgtccttcagagttgtagac
cagcagcagattgaacgtcactttaccatgaacgaactgacggagctctacgcgtttgag
cccgacctgctggacgatccatctgagaagaagagcaagcgcgccacacccatgctgccc
aaggatcctttcctggcagaactccttcacagttacaaagatcatatcgtcggctaccac
gagcatgactctttgctggaccacaaggaggaagaggcactgagtgaggaagatcgtaag
gcggcctgggccgaatacgaggccgaaaagaaggggctgtccatgcgtttcaaccagccg
tcctattctcagatgggcatgggagcgggaccaaactcttacttccccttcaacgtggct
gctttggcctccatgagtaaccaacagttggaggaattgattaaccagggcaggcagaaa
gtgatggaagctgctaacgctctgaagtcagtgcccagggaaccactggaggacatcatc
gggcaggtgtggaaggagaacccgagtttacccgaggcccaggttcagtccatggctgtt
gggaggcaggccggctacgagatggaaatgaaacacagggaggctgtttaccgtgatgtc
ctcggcaagcaacaaactctgatgatgtacgtgcagaaggtgatcgccaaccgtaaggtg
caggagcagcagctggccatggcgaggcagggtctgctgctcaaccagctggccatgcag
aatggtcttactggtcccataaatcagatggatctgctggggttgtaccagcagctcggg
gcgctccagggcctcccctcctcacagctgggcaagaacccgggcccgtctaagggcctg
tag
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integrated database retrieval system
