Cyprinus carpio (common carp): 109080218
Help
Entry
109080218 CDS
T05134
Name
(RefSeq) transcription factor RelB homolog isoform X1
KO
K09253
transcription factor RelB
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04010
MAPK signaling pathway
ccar04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109080218
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109080218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109080218
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
109080218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
109080218
NCBI-ProteinID:
XP_042595230
UniProt:
A0A9Q9X4S4
LinkDB
All DBs
Position
B15:13123141..13132788
Genome browser
AA seq
603 aa
AA seq
DB search
MTAGFFTLRRVIVIRCLLSVSVLSTHAPLPHTKDTQSHTLLSASHFLIGWFFVQLCELPV
SSPCCFWLFSAALCNPYSFDQTPTAHTDGMAPMHSMRSHKVASQRRGQSSLAPQSLHPPQ
TGTEHLERFLEKPELVVVEQPKERGMRFRYECEGRSAGSILGASSTDSSKTLPAIEIQGP
IENIKKVMVTVSLVTKDIPYRPHPHCLVGKDCADGICVIHINPHSARRHSFANLGIQCVR
RKELDASLQKRRNKNIDPFNTGHSKSIEDMDMNVVRLCFQCELERKDGDRIPLAPVVSNP
VYDKKATTTAELKINRLNIVRGPCTGKTEIYMLCDKVQKDDIEIIFSKDDWEAKAEFAQT
DVHRQIAIVFKSPPFREQNITEEEEVSVCLRRMSDRMDSEPVKFTYVPDNADPYGVNRKR
KMKSDVKISEPCSVPQNQDIANELSMSQHFDNQFYAPLDCNVPNASMAVPVMDGGVHMPS
QVMEEIPYNEDLKQEDGCVSLDPETLDTVLKGISQCLASYRPDQSQQGSDQFLTQLFFHG
DLNFGLDGTDMKLNTSQPMMNMSSINDAHFSQMVNENQAYPPDLENIEGLMFSPVKSEND
LDH
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaggcttttttactcttcgacgggtgattgtaattcgatgcctactttcagtt
agcgttctctccactcatgctcctctcccccatacaaaagacactcagtctcataccctc
ctctctgcttctcactttctcattggctggtttttcgtccagctctgtgagcttcctgtt
tcttcaccatgctgcttctggctcttctcagcggctctttgtaatccatacagctttgac
cagaccccaacggcgcacactgatggtatggcgccgatgcattccatgcgaagccacaaa
gtggcatctcagcgacgtggacagtcgtccttagcaccccagagtcttcatcctccgcag
actggaacagaacatctggagcgcttcctggaaaagccagagctggtggtggtggagcag
ccgaaggagcgcggcatgcgatttcgctatgagtgcgagggacgatccgcgggcagcatc
ctcggagcctccagcactgactccagcaagaccctgcctgccattgaaatccaaggtccc
attgaaaacattaagaaagtgatggtcaccgtgtctcttgtgacaaaggacatcccatac
cgcccacacccacactgcttggtcgggaaagactgtgcagatggcatctgcgtcatccac
atcaatccccacagcgctcggcgacacagctttgcaaatcttggcatccagtgtgtgcgg
aggaaggaacttgatgcctcactgcagaagaggagaaacaagaatattgatccgtttaac
acgggccactctaagagcattgaggacatggacatgaacgtggtgagactgtgtttccag
tgtgagctggaacgaaaggatggagaccgaatccccctcgcccctgtggtttccaacccc
gtctatgacaagaaggcgaccacaacggcagagctgaaaatcaatcggcttaatattgtc
agaggcccctgcacaggaaagactgaaatttacatgctctgtgacaaagtgcagaaagat
gacattgagataatcttcagcaaggacgactgggaggccaaggcggagtttgctcagact
gatgtccaccggcaaatcgccatcgtcttcaagtccccacccttcagggagcagaatata
accgaggaggaggaggtcagtgtgtgtcttcgccgcatgtctgaccggatggacagcgag
ccagtcaagttcacttacgtcccagacaatgcagatccttacggagtcaaccgcaagagg
aaaatgaaatctgacgtgaagatcagcgagccatgcagcgttcctcaaaatcaagacatt
gcaaatgaactcagcatgtcacagcattttgacaaccaattctacgcccctctcgactgc
aacgttcccaatgcttccatggcagtccctgttatggacggaggtgtccacatgccatcc
caggtcatggaggaaattccctataatgaagaccttaaacaagaggacggttgtgttagc
ctggacccagaaactttggacaccgtcctcaaaggcatttcccaatgccttgccagctac
agaccagaccaatcccagcaaggttcagaccagtttcttactcagttatttttccatggc
gatctcaactttggtttagatggcacagatatgaaattgaacaccagtcaacctatgatg
aatatgtcgtctataaacgacgcacacttcagtcagatggtaaatgagaatcaggcctac
ccaccagatctggagaacatcgaaggtctcatgttttcccctgtgaagagcgagaacgac
ttggaccactga
DBGET
integrated database retrieval system
