Cyprinus carpio (common carp): 109080398
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Entry
109080398 CDS
T05134
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109080398
04121 Ubiquitin system [BR:
ccar04121
]
109080398
Enzymes [BR:
ccar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109080398
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109080398
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109080398
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
zf-RING_5
zf-C3HC4
zf-B_box_Trim66
Beta-prop_IFT122_1st
zf-RING_2
Ig_GEX2_N
DUF4094
Motif
Other DBs
NCBI-GeneID:
109080398
NCBI-ProteinID:
XP_042627939
UniProt:
A0A8C1SHU8
LinkDB
All DBs
Position
A16:complement(2420364..2455505)
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AA seq
824 aa
AA seq
DB search
MCEVILWSSAQMASFPDSDLQTCPLCKELCGCSAPISSNSSTSSSSSQTSNSSSTSSTRR
LHVLPCLHAFCRQCLEGHRSPGDPLKLRCPTCDQKVSLSESGVDALPSSNFLFSNLLDVV
VSAEEQGKNGRSSSVVHHGGLLRPQHLSDPQCSSCDEGNPAASHCLDCQEYLCDNCVRAH
QRVRLTKDHFIEGLLESLHLANRTNNSNTPINISQSFHNSFSMLNVFQERMDFCQQHDDA
VLRFFCDSCGVPICRECSLGRHAGHSFTYLQEALQDSRALTIQLLADAQQGRQAVQLSIE
KAQAIAEQVELKAKVVQSEVKTITLRHKKALEERECELLWKVEKIRQVKAKSLYLQVEKL
HKSLTKLDSTIATVTQVLEEGRSIDVLLAREHMLNQLQELKSIRCILQPQEDDRIMFTPP
DQALLIAIKSMGLISSGAFATASKAHGEGLKRALQGKLASFTVIGYDHDGEPRLSGADSI
SVVLMSPDGNLSSADVSDHQDGTYTVSYLPKCEGEHLLSVLICNQHIEGSPFKVMVKSGR
SYGGVGLPIASFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNNRVQIFKPCGTFHHKFG
TLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQIFTFDGQFLLKFGEKGTKNGQFNYPW
DVAVNSEGKILVSDTRNHRVQLFGPDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVT
DFNNHRLLVIRPDCQSARFLGSEGTGSGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPN
GNFLCKFGTHGNGFGQMDRPSGIAVTPDGMIVAVDFGNNRILMF
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgaagttattttgtggtcctctgcgcaaatggcgtctttcccagactccgacctg
caaacatgtccgctgtgcaaggagctgtgcggctgctctgctccgatctcctccaattca
tctacctcctcctcgtcctcccagacctccaactcctcatctacctcatccaccaggaga
ctgcacgtcctgccctgtctccacgccttctgcaggcaatgcctagagggccacaggagc
ccaggtgaccctctgaagctcagatgccccacatgcgaccaaaaagtgtctctgtcggaa
tcaggcgtggacgcgttgccttcctccaactttctcttcagcaacctgctggatgtggtg
gtctctgctgaggaacagggcaagaacggtcggtcttcatcggtggtccatcacggtggt
cttctgagaccccagcacctctcagaccctcaatgcagctcttgtgatgagggcaacccc
gctgcttcccactgcctggactgccaggagtacctgtgcgataactgcgtcagggctcac
cagagggtccgactcaccaaagaccacttcatcgaggggcttctggagagcttacacctg
gccaaccgcaccaacaactccaacaccccgatcaacatctcccagtccttccataacagc
ttctccatgctgaatgttttccaggagaggatggacttctgccagcagcatgatgatgcg
gtgctgcggtttttctgtgatagctgcggtgtgccaatctgtagagagtgcagcttaggc
agacatgcgggtcacagtttcacctacctgcaggaagcactgcaggactccagagcgctg
accatccagcttctcgcagacgcacagcagggcagacaggctgtacagctgagcatcgag
aaagcccaggccattgctgaacaagtggaactgaaggctaaggttgtgcagtccgaagtg
aaaaccatcactcttcgtcacaagaaagctctggaggaacgcgagtgtgagctgctctgg
aaggtggagaaaattcgccaggtgaaggcaaaatcactttacctgcaggttgagaagcta
cacaagagtctcaccaagctggatagtactatcgccacagtgacacaggttttagaagag
ggccgtagcatagatgtcctgctagcacgagagcacatgttaaatcagctacaggagctt
aaatccatccgctgcatcctgcagccccaagaagacgatcgcattatgtttacaccacca
gaccaggctcttctgattgccattaagtccatgggcctcatcagcagcggagccttcgcc
acagcttccaaagctcacggtgaaggcctcaagagagcactgcaaggaaagctagcttcc
tttactgtcatagggtatgatcatgacggtgagcctcggttgtctggtgctgacagcatc
tcggttgtgcttatgagtcctgatggtaatctgtccagtgcagatgtttccgaccaccaa
gatggaacgtacacagtcagctatctgcccaagtgcgagggtgagcatttgctctctgtg
cttatatgcaatcagcacattgagggaagtcctttcaaagtgatggtcaaatccggtcgc
agttacggcggtgtaggcctgcccattgcatctttcggaggagagggcgatggggatggg
cagctgtgtcggccttggggcatctgcgtggataaggagggctacgtggtggtcgctgac
cgaagcaacaaccgtgtgcagatcttcaagccttgtggcacgttccaccacaagtttggc
accttgggctcacgaccgggccagtttgaccgccctgctggagtcgcctgtgacagccaa
aggagaatcattgtggcagataaggacaatcaccgcatccagatctttacctttgatggc
cagtttcttctcaaatttggtgagaagggaaccaaaaatgggcagtttaactacccatgg
gatgtggccgtcaactctgaagggaagatcctggtttcagatacacgcaaccaccgcgtg
caactctttggacctgacgggactttccttaacaaatatggattcgaaggtgccctctgg
aaacattttgactctcctcgcggcgtggccttcaatcaggaaggccaccttgttgtgact
gacttcaacaatcatcggctgcttgtcatcaggcccgactgccagtcagcacgcttcctt
gggtctgagggaaccggaagtggccagttcttgcggcctcaaggtgtagcagtggaccag
gaggatcgtattatcgtggccgattcccgcaaccatcgcattcaggtgttcgaacccaac
ggcaactttttatgcaagtttgggacacacggtaacggcttcgggcaaatggatcgcccc
tcgggtatagcggttaccccagatggaatgattgtagctgtggactttggaaacaaccga
atcctcatgttctga
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integrated database retrieval system
