Cyprinus carpio (common carp): 109080632
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Entry
109080632 CDS
T05134
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04514
Cell adhesion molecule (CAM) interaction
ccar04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
109080632
04517 IgSF CAM signaling
109080632
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109080632
Cell adhesion molecules [BR:
ccar04515
]
Immunoglobulin superfamily
NGL family
109080632
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
LRRNT
Ig_2
LRR_EndoS
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
109080632
NCBI-ProteinID:
XP_042581100
Ensembl:
ENSCCRG00000028301
LinkDB
All DBs
Position
A3
Genome browser
AA seq
558 aa
AA seq
DB search
MRITTVTSLPSPSPLLLLLVQLLLWLILPGQEAVGAASTCPAPCSCSNQASRVICTRRNL
EEVPNSISNNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLINLRYLNLGMCGLKDIPNLTPLVRLEELELSGNRLEIIRPGSFQGLESLRK
LWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLQKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPYLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTTTSMTSVNWITPNGTLMTHGSYRVSISVLHDGTLNFTNVTLRDTGQYTCI
VTNSAGNTTATAVLNVTAADVSVNYTYFTTVTVETVESTGEEDSALRTITETIHIPGPKP
SGHPWIEVFPTTASSLSILTSSSSPRATKPTFTVPISEPSYPSGLDDVMKTTKIIIGCFV
AITFMAAVMLVVFYKLRK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgaccagccttcctagtccctcccccctcctcctcttattggtt
cagctgctgttgtggctcatcctcccaggtcaagaggcagtgggagccgcctccacctgt
cccgcgccgtgcagttgttctaatcaagctagtcgagtgatctgtacaagacgaaactta
gaagaggtgcccaacagtatatcaaacaacacacgatacctcaacttacaggagaactca
atacaggtgataaaatcagacacgttcaaacatttgcggcacctggagatcctccagctc
tccaagaaccagattcgtcagatagaggtgggtgctttcaatggcctcccaaacctcaac
actctggaactgttcgacaaccgcctcacgctggtgccatcgcaagcttttgagtacctc
agcaagttgcgggaactgtggttacgaaataatcccattgagactttaccaggctacgcc
tttcaccgcgtcccctcgttgcggcgtcttgacctaggcgaactcaagaaactggattat
atatctgatgcagcctttgttggactcatcaacctgcgctacctgaacttaggtatgtgt
ggcctaaaggacatccctaacttgacccccctggtgcgactggaggaactagagttgtct
gggaaccgtcttgaaatcatcagacccggatccttccaaggcctggaatctttgcgcaaa
ctatggctcatgcactctcagatgtcggtcatcgagcgcaatgctttcgatgatctcaag
aacctagaggagcttaacctatcccacaattccctgcactctctgccccatgaccttttc
acaccactgcagaagctggaacgagtgcacctcaatcacaacccatgggtgtgcaactgc
gatgtgctttggttaagctggtggctgaaagaaactgtgccaagcaacacaacttgctgt
gcgcggtgccacgcaccaccctaccttaagggaaagtacataggagagctagaccagagc
catttcacctgctatgcccccgtcattgtggagccgcccactgacctcaatgtaaccgag
ggcatggctgctgagctcaagtgtcgcaccactacctccatgacctctgtgaactggatc
acaccgaacggcaccctaatgacccatggctcctatagggtcagtatttccgttctgcat
gatggcacactgaatttcaccaatgtaactctgcgtgacactggccagtacacctgcatt
gtgaccaactcagctgggaacacaacggcaactgctgtcctgaatgtgaccgcagcagac
gtcagtgtcaactacacctacttcacaacggtcactgtagaaactgtggagtctacggga
gaagaagattctgcattgcgtaccatcaccgagaccatccatattcccgggcctaaacct
tctgggcacccctggattgaagttttcccaactactgcctcttctctctcaatccttacc
tcatcgtcctctccccgagcaaccaaacccactttcacagtccctatttctgagcccagc
tatccttctggactagatgatgtaatgaagaccaccaagatcataatcggttgcttcgtg
gccataactttcatggctgccgtcatgctggtggtgttctacaaactgaggaagtag
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