Cyprinus carpio (common carp): 109080845
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Entry
109080845 CDS
T05134
Name
(RefSeq) PH-interacting protein-like
KO
K11797
PH-interacting protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccar04121
]
109080845
Ubiquitin system [BR:
ccar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109080845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Bromodomain
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_SPT8
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_DCAF4
McrBC
WbmS-like
Motif
Other DBs
NCBI-GeneID:
109080845
NCBI-ProteinID:
XP_042606272
Ensembl:
ENSCCRG00000045237
UniProt:
A0A9Q9XQR3
LinkDB
All DBs
Position
B23:complement(18781286..18822905)
Genome browser
AA seq
1812 aa
AA seq
DB search
MAAERKHIAQLKSELYFLIARFLEAGPCQDAAETLIREVQEKELLPKRIDWTGKEHPGSY
ENLVKLYRHISPDHLLQVCERVSPLLEREVPASVPGVNSLLGAGRQSVLRTNKSCKHVVW
KGSALAALHCGRPPEPPVIYGSPPNIVETIYSRRLNGSYRLGQLVPTAVYQHMKMHKRIL
GHLSSVYCVTFDRTGHRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTLL
AAGSCDKMIRVWCLQTCAPLAVLEGHSASITSLQFSPLCSGNKRFLSSTGADGTICFWQW
DARTLKFGQRPSKFIERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYYFGDGQPEKISE
LESHTDKVDSIQFSHGGDRFVSGSRDGTARIWQLQQQDWRSILLDMATKLPGKYNPPPLE
DKVTKLKVTMVAWDCNDNTVITAANNLTLKVWNSYTGNLIHILMGHEDEVFVLEPHPFDS
RVLFSAGHDGNAIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLL
IFGFGSSSRYDKIADQMFFHTDYRPLIRDAHNFVLDEQTQQAPHLMPPPFLVDVDGNPHP
PRYQRLVPGREDCREEQLIPQMGLTSSGLNQVVSQQAAEGSSPLDGIIQRLQQEQDQRLG
SDTRASRGSVSSPTEVSSPPNVGLRRSGQIEGVRQMHSNAPRSEIATERDLVAWSRRVLV
PELSPAIACKQEIWRAAKGEEEINIYRSERRRRSVHSQYHRENRHATENSAEEGRRHHHN
NHNNHKTLSAEETTSRQSEPNEEEHSASEGENEARPPSRESSDEEREEKEPWPDDNSSSS
DYSSDYSDWTADAGINLEPPKKTSVKKKKKNASSSEEDGEKKKDSKKERRKEKQDKDGTL
PKKKKPKEKRKRIPEMQNQGLTLEEWLPSAWITDTMPRRCPFTPQMGDEVYYFHQGHEAY
VEMAKKNKIFSINPKKQPWNKLELREQELLKIVGIKYEVGLPTLCCLKLAFLDPDTGKLT
GGSFSLKYHDMPDVIDFLVLRQQFDNARQRNWMIGDRFRAVIDDAWWFGTIESQEPYQAE
YPDSLCPVLQQTWDNGDTEKMSPWDMEEIPNEAAFPDELGLSVPLTEEEQKALLYKPLEG
EWGSRTRDQECERIIRSIDQLCTLDVAAPFELPVDLQAYPTYCTVVAYVTDLSTIRQRLQ
NRFYRRMSSLMWEVRYIEHNAQTFNEPGAFIVKTAKFVSDLMLQFIKDQSCTDIIPLYNS
MKKTAFSDSSDDEDEDEEREAPCTSSRNKKRQRQQPILRSLRSKPTSDPQSWKGRCRELL
ELIFQCEDSEPFRQPVDLEEYPDYLDIVDTPMDFTTVLNRLLEGEYDTPMDLCKDVRLIF
SNSKAYTPSKKSRIYSMSLRLSALFEEHISSILTHFKAAQSLHSERFTRQRLHTERLTRQ
SVKRTRSSSPSSSASSPERKRRVSSRAPPRSDNAAPPTPAGPSRAPSLRQTHPQINGKTE
PPVVPGRTRSSARFGTQLTDAPSTLSAPPPPPSHSKTAEPSSRVLRTQNSHSIGASRETE
SSAVPHTNECGARESRRKLRTPVKLTPGPIDHDSSPQNSLHLNGHSQVTLGVVRRGRGRP
RSDAQIQTPVAVPLPPLPQASGKKRGRKSKKELESLRRSSSHEEELHLSTGDEGGASSTA
QDSSLSDSGVVTPEFPKQRGRPRVIRMPDTPAPSSPKALRRSSRRGNEETTPPMPGPTQR
EEPDIYMGEDGSSKGQMRTRNQGRRTAFYNEEDSEEEQRQLLFEDASITFGTSSKGRVRK
LTEKAKANLIGW
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgagcgtaaacacatcgcgcagttgaaatccgaactgtacttcctaatagcc
cggtttttagaagctggaccctgtcaggacgcggcagagaccttgatacgggaggttcag
gagaaggagctgttacccaaaaggattgactggactggcaaagaacacccagggagttac
gaaaatttggtcaaattatacaggcacatttctccagatcacctgttgcaggtgtgtgag
cgagtgagtccacttttagagagagaagtgccagccagcgtacctggagttaactcactg
ctgggagctggacgccagtcagtgctacgtacaaacaagagttgtaagcacgtggtatgg
aaggggtctgccctcgcagccctgcactgtggcaggccacccgagccgccagtcatctac
ggaagcccgcccaatattgtggaaacaatatacagtcggaggctgaatggctcatatcgg
ttgggtcagttggttcctacagctgtttaccaacatatgaagatgcacaagagaattctg
ggacacctgtcatctgtgtactgtgtcaccttcgaccgcaccggtcaccgcatcttcaca
ggttcagacgactgtttggtgaagatctgggcaacggatgatgggcgtttgcttgcaaca
ctgagaggtcatgcggcagagatttcagacatggctgtgaattatgagaacaccctgctg
gcagccggcagctgtgataaaatgatcagagtgtggtgcctgcagacctgcgccccgctg
gcagtactggagggacactcggcatccatcacgtcattacagttttctcctctgtgcagt
ggaaataagagattcctgtcctccactggagctgatggcaccatctgtttctggcagtgg
gatgcacgcacgctcaaattcgggcagcgacccagcaaattcatcgagcggcccagacca
ggcgtgcagatgatctgttcctcttttagtgcaggtgggatgttccttgcgacaggcagc
actgatcacatcattagggtttattactttggagatggacaaccagagaagatatctgag
ctggagtctcacactgacaaagtcgacagcatccagttctcccatggtggcgatcggttt
gtgagtggcagtagagacggcacagcacggatatggcagctgcagcagcaggactggcga
agcattctcctggacatggccactaagctacctggcaagtacaaccctccacctttagag
gacaaagttaccaaactgaaggtgactatggtggcctgggattgcaatgacaacacagtc
attaccgctgcgaacaacttgacattgaaagtgtggaactcgtacacagggaaccttatt
catatattgatgggccatgaggatgaggtgtttgtgttggagccgcatccttttgattcc
agagtgcttttctctgctgggcatgacggaaatgccattgtctgggatctggcaagagga
gtcaaaatacgctcttactttaacatgatcgagggtcagggccatggtgcggtctttgac
tgtaagtgctctccagatgggcagcacttcgcttgcacagactcccatggtcacctgctc
atctttggcttcggctctagcagcagatacgacaagatagcagatcagatgttcttccac
actgattatcggccgcttatccgtgatgcccataactttgtgctggacgagcagacccag
caggcacctcacctcatgccgccaccattcctggtggatgtggacgggaatcctcaccct
ccacgctaccagagactggttcctggcagagaggactgcagagaggaacagctcataccc
cagatggggctcacatcatcagggctgaatcaggtggttagtcagcaggctgcagaaggc
tctagtcctcttgatggtattatccagagactacagcaggagcaggaccagagactgggg
tctgacaccagagccagcagaggatctgtcagttctcccacagaggtctcttctccacct
aacgtgggtctgagacgcagtggacagatcgaaggtgttcgccagatgcatagtaacgct
ccacgtagtgagattgccaccgagagagacctggtggcatggagtcgaagggttctcgtt
cctgaactatcaccagctatagcttgtaagcaggagatttggcgtgcagctaaaggagaa
gaggaaatcaacatctacaggtcagaaaggaggagacgcagcgtgcacagccagtaccac
agagaaaaccggcatgctacagaaaattctgcggaggaggggcggcgtcaccaccataac
aaccataacaaccacaaaacactatccgccgaggaaacaactagtcgtcagagtgaaccc
aacgaggaagaacacagtgcttctgagggagaaaacgaagcaagacctccgagcagagaa
tcatcagatgaggaaagagaggaaaaagaaccctggcctgatgataacagcagctccagc
gattactccagcgattactcagactggacagcagatgctggaataaacctggaaccgccc
aagaagaccagcgtgaagaaaaagaagaagaatgccagcagctcggaagaagatggagag
aagaaaaaagactccaagaaggagaggaggaaagaaaagcaggacaaagatggtacacta
ccaaagaagaagaagccaaaggagaaacggaagaggatacctgaaatgcagaaccagggt
ttgacattagaggaatggctgccctccgcctggatcactgacaccatgccacggagatgc
cccttcaccccacagatgggcgatgaggtatattatttccatcaaggccatgaagcttat
gtggagatggccaaaaaaaacaagatcttcagtataaatcctaaaaaacagccctggaac
aagttagagctcagggagcaggagctgttgaagattgtgggcatcaagtatgaggttggt
ttgcctactctgtgctgtctgaagctggccttcctggacccagacactggcaaactgacg
ggcggctctttctcattgaaataccacgacatgcctgatgtcatcgacttcctggtactt
cggcagcagtttgataatgcaagacagaggaactggatgataggtgatcgtttccgtgca
gtgatagatgatgcctggtggtttggtacgattgagagtcaggagccttaccaagccgaa
tatccagactctctgtgtccagtgctacaacaaacctgggataatggagatacagaaaag
atgagcccatgggacatggaggagattcccaatgaagcagcatttcctgacgagttaggt
ctgagtgtgcctctaactgaggaggagcagaaagccttattgtacaagccactagaagga
gagtggggctcacgcacacgtgaccaagagtgtgagcgcatcatcagaagcatcgaccag
ctttgcactttggatgtggctgcaccatttgaactgccagtggacttgcaggcatatcca
acatattgcaccgtagttgcttacgtcacagatctgagcactatccgacaaagactgcag
aaccgtttctataggcgaatgtcatcgttgatgtgggaggtacgctacattgaacacaat
gctcaaaccttcaatgaaccaggcgctttcattgtcaaaactgccaaattcgtatctgac
ctcatgctacaatttatcaaggaccaaagctgtacagatattattccactgtataacagt
atgaagaaaactgctttctcagattcaagcgatgatgaagatgaggatgaagaacgcgag
gcaccttgtacatctagccgcaataagaagaggcagcggcagcagcctatcctgaggagt
ctgcgcagtaaaccaacatcagacccccagagctggaaggggcgctgcagagagctgctg
gagctcatctttcaatgtgaagattcagagcctttcagacaacctgtggatctggaggag
tatccggactacttggacattgtggacactcctatggactttacgactgtcttgaaccgc
ctgttagaaggagagtatgacactcccatggatctttgtaaagatgtacgcctcatcttc
agcaactccaaagcctatacacccagcaaaaagtccaggatctacagcatgagtctgcga
ttgtctgctctgtttgaagagcatatcagttcgatcctgacccattttaaagctgctcaa
agtctgcacagtgagcgattcacccgtcagcggctgcacaccgagcgcttgaccagacag
tctgtaaagaggacgaggagctcttcaccttcaagctccgcttctagtccagaaaggaag
cgtcgggtttcgtctcgcgctcctcctcgatcggacaatgcagctccacccactcccgct
ggaccttcccgggctccttctttacggcaaacacatccacagatcaacggcaagactgag
cctcctgttgtccccggtcggacacgaagctcagcccgctttggaacccaactcacagat
gcaccttctacactgtcagctcctccccctccacccagccacagtaagacagcagagccc
tcctctagagtcctgcgcacacagaactctcattccattggtgcctcgagggaaactgag
agctctgcggttccccacacaaatgaatgcggggccagagagtctcgcaggaaacttcgg
acacctgtaaaactcacaccaggtccaatcgatcacgactcttctcctcaaaacagtttg
catttaaatggtcatagtcaagtgactcttggagtggtacgaagaggccggggccgaccc
agatcagacgcacaaatacaaacgccagtagcagtaccgctgcccccactgccccaggcc
tctggaaaaaagagagggaggaaaagcaagaaagagctggagtccctacgaagaagctcc
tcccatgaggaggagcttcatctgtctactggtgatgagggcggggcttcttctacagcc
caggacagtagtctttcagattcaggtgtagtgactccagagtttcccaaacaacgaggc
agaccacgagtcatcaggatgccagataccccagctccttcaagccccaaagctctcaga
aggagcagtcggcgtggaaacgaagaaaccacacctcctatgccaggccccacccaaagg
gaggagcctgacatttatatgggagaggatgggagctcgaaagggcagatgagaacgcgt
aaccaaggccgaaggacagctttctataacgaagaagactctgaggaagagcaaagacag
cttttgtttgaggatgcttcgattactttcggcacgtcaagcaaagggagagtccgcaag
ctcactgagaaggccaaagccaaccttattggctggtaa
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integrated database retrieval system