Cyprinus carpio (common carp): 109081108
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Entry
109081108 CDS
T05134
Name
(RefSeq) transcription factor Sox-14-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109081108
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109081108
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
V1R_C
Motif
Other DBs
NCBI-GeneID:
109081108
NCBI-ProteinID:
XP_042575240
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All DBs
Position
B2
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AA seq
227 aa
AA seq
DB search
MNTRNMMKQPMEHIKRPMNAFMVWSRGQRRQMALENPKMHNSEISKRLGAEWKLLSESEK
RPYIDEAKRLRAQHMKEHPDYKYRPRRKTKGLLRRDTLLTLPRHGEQKLQSISNLDKPRP
LYSAASMQHPFMEPSRPTVSSAFQPEKLALTPGSLAFSSAFVYQSGHRSFGSLGCSGQYA
HTHLSPANPGYLLPCNCSPWSSSSLTPPLAYIVFPGMSQTAVSSTAL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgagaaacatgatgaagcagcccatggagcacatcaagagaccaatgaacgcg
ttcatggtctggtcgcgaggtcagagaagacagatggcactggagaacccaaagatgcac
aactctgagatcagcaagagactcggcgccgagtggaagctgctctctgagtctgaaaaa
agaccttacatcgacgaggccaaaagactacgcgcccaacacatgaaagagcatccagac
tacaaatatcgaccgagacgcaaaactaaaggactgctgagaagagacacgctgctgact
ttaccgcgtcacggcgagcaaaaacttcaatccatctcaaatttggacaaacctcgaccc
ctttattcagctgcgtccatgcaacatcctttcatggagccgagccggccaactgttagc
agtgcttttcaacctgaaaaacttgctttaaccccgggctcgttggctttctcttcagct
tttgtctatcagagtggacaccggtccttcgggagtctgggatgctcgggtcagtacgcg
cacactcacctgtcacctgcaaaccccggatacctgctgccctgtaactgttcgccctgg
tcttcttccagtctcacacctccacttgcctatatagtgtttccaggtatgagccagact
gcggtcagctctacagcgctgtga
DBGET
integrated database retrieval system
