KEGG   Cyprinus carpio (common carp): 109081365
Entry
109081365         CDS       T05134                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109081365
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccar03019]
    109081365
   03041 Spliceosome [BR:ccar03041]
    109081365
Messenger RNA biogenesis [BR:ccar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109081365
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109081365
Spliceosome [BR:ccar03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109081365
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_PARP14_1 RBD_AKAP-17A RRM_3
Other DBs
NCBI-GeneID: 109081365
NCBI-ProteinID: XP_042606772
Ensembl: ENSCCRG00000050096
UniProt: A0A9R0APU1
LinkDB
Position
B23:complement(24586950..24590744)
AA seq 386 aa
MSKEGQPREPEQLRKLFIGGLSFETTDDSLRAHFEQWGALTDCVVMKDPNTKRSRGFGFV
TYSNVTEVDAAMDARPHKVDGRLVEPKRAVSREDSNKPFAHTTVKKIFVGGIKDDTEENH
LRDYFKHFGKIEAVEIMVDHKTGNKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKA
LSKQEMQNTGMNMRGRGGGGGGGGNFNRYGNNGGYNSDFGGGGGGNRDGYFGRGGRGGGG
GSGGYGGDNYNNGFGGGDGNYGGSPGNYGGNRGYGGGGGGGGHGYGNQGGGYGSGGGGNS
GGGGYNDNYNNGNGNFGGGNFGGGGGGGGGNYSDFGSYNNQQSNYGPMKGNFGSGGGGGR
NSGPYGGGYGGGSGGGYGGSSGGRRF
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgtcaaaagagggccagccacgtgagccagagcagctgcggaagctcttcattggaggg
ctcagctttgaaaccacagacgatagtttgcgggcgcattttgaacaatggggcgcctta
acggattgtgtggtgatgaaagatccaaacaccaaacgctcgaggggatttgggttcgtc
acttattccaatgtgaccgaagtcgatgctgctatggatgcacggccccataaggtcgac
ggtaggctcgtggagcccaaacgagccgtgtctcgagaggactccaacaagccatttgcc
cacacaactgtgaagaagatctttgtgggtggcattaaagatgacacagaggagaaccat
cttcgcgattacttcaaacattttggcaaaattgaggccgttgagataatggtggaccac
aagaccggaaacaaaagaggctttgcttttgttacgttcgacgaccatgactccgttgat
cgtatcgtcattcagaaataccacactgtgaatggacacaactgtgaagtcagaaaagct
ctgtctaaacaagagatgcaaaacactggcatgaacatgagaggccgtggtggtggtgga
ggaggaggtggaaacttcaacagatacggcaacaatggcggctacaacagtgactttgga
ggtggcggcggcggcaaccgggatggctattttggaagaggagggagaggtggtggaggc
ggcagtggcggttatggaggcgacaactacaacaatggatttggtggcggagatggtaat
tatggtggcagccctggaaactatggtggaaatcgtggatatggaggtggcggcggagga
ggaggacatggttatggcaaccagggtggcggttatggtagtggtggtggcggcaacagc
ggcggcggtggctataatgacaattacaacaatggcaatggaaactttggaggtggcaac
tttggaggtggtggtggcggcggaggtgggaactacagtgactttggcagctataacaac
cagcagtccaactatggtcccatgaaagggaactttggaagtggtggaggcggaggaaga
aacagtggcccatatggtggtggctatggcggtggatctggtggtggatatggaggcagc
tctggtggtagacggttttaa

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