Cyprinus carpio (common carp): 109081655
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Entry
109081655 CDS
T05134
Name
(RefSeq) transcription factor Sox-11-like
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109081655
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109081655
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109081655
NCBI-ProteinID:
XP_042630195
Ensembl:
ENSCCRG00000032870
UniProt:
A0A9Q9Z198
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Position
A17:complement(16833166..16836657)
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AA seq
335 aa
AA seq
DB search
MVQQTDNSETDSMSREATDSDESEFMVSINPDWCKTATGHIKRPMNAFMVWSKIERRKIM
EQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPKKKPKLDS
SSKPSAPSPEKSCNKMTKNSKKCPKLKTNKTGSKSSHGYGDEYAFKSMKVSKTVIKSEFT
DEDDDDDSEEDSRVRVKEEEEDAIRAYNVAKVPASPTLSSSTESDGASMYDEVRNNRLFY
NFKNITKQSTMYPASVSPASSRSVSTSSSTSEDADDLLFDFSLNFASSAQSSELGNQNPG
NLSLSLVDKELESFSEGSLAPTLNFQTIARLSSAK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaaacggacaacagcgaaacggacagcatgtccagagaagccaccgactcc
gacgaaagtgaattcatggtttcgataaacccagattggtgcaagacagcgaccggacac
ataaagcgaccgatgaacgcgtttatggtgtggtctaaaatcgagcggagaaagatcatg
gaacagtctccagacatgcacaatgccgagatctccaaacgtttggggaagcgctggaaa
atgctgaaggacagcgaaaagataccttttatcagggaagccgaaagactccggctgaaa
cacatggctgattatcctgactacaaatacagacccaagaagaaaccaaagctggacagt
tcctccaaaccgtcagccccatctccagagaagtcctgcaacaaaatgaccaagaactcc
aagaaatgtcccaaactgaaaacgaacaagacgggaagtaaatcttctcacggctacgga
gatgagtacgcgtttaagagcatgaaagtttcaaagactgtcattaaaagtgaattcacg
gatgaagacgacgacgacgactccgaggaggactctcgagtccgagtgaaggaggaggaa
gaggatgcgatccgagcctacaatgtagcaaaggttcccgccagcccaactttgagctcg
tctacagagtccgatggcgctagcatgtacgatgaggtccggaacaacagactgttctac
aatttcaaaaacatcaccaagcagagcacaatgtatcccgcatccgtctcaccagcatcc
tctaggtcagtttccacttcttccagcacgagcgaagacgcggacgacttgctttttgac
ttcagtttgaacttcgcctcctccgcgcaaagctcggagctgggcaaccaaaatccaggg
aatctctccctttctctggtggataaggagttggagtcttttagcgagggcagcctggct
cccactttgaatttccagactattgcacgcctgagctcagcgaaatga
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integrated database retrieval system
