Cyprinus carpio (common carp): 109081777
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Entry
109081777 CDS
T05134
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109081777 (gapvd1)
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109081777 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
Motif
Other DBs
NCBI-GeneID:
109081777
NCBI-ProteinID:
XP_042585919
Ensembl:
ENSCCRG00000036085
UniProt:
A0A9Q9WM34
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All DBs
Position
B8:complement(16670310..16711813)
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AA seq
1489 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNNEVLKTAERLYRTAWIAKQQRINLDRLIL
TSAEASPAECCQHAKVLEDTQFVDGYKTLGFQESIYGEFLGRLRENPRLVASCLVAGERL
NHEHTQGVIHTVFTSLYGNCIMQEDECYLLQVLRYLVEFELKESDNPRRMLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPAKLIERFTPAQQERLFGEKGT
DEYRRKVQAAVEANEAKLVALVNTFIGYLKQNTYCFPQSLRWIMSQMYKTLARVERLEVG
EVRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMSDADDGD
PRRKSSLSKFDKTCVAAFLDVVIGGRAVETPPMSSMNLLEGLARTVVYMTHNQLLALVDF
VRSVTAGDQLREEDHLALETLLANVPQSRTTKSNSLELTPSNTPQLSPATTPANKKNRLP
IGQQLAAITCWEPSATALSAHIPLVTPFAGSRSRSRSNVAQEGEIEASSQESLQEVTPED
VLVISLGTSLQTVPGMMSENEVLTLHLGDGGQGDAPVDDTKLHGKPDKTLRFSLCSDNLE
GISEGPSNRSNSVSSLDLEVESVSEGGPGPSGSNGAEALQLLEHEQATTQDNLDDKLRKF
EIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNMDEDRLQEMAGAAAENALGSLLCLPV
LLDPYGSTISETTSEAWSVEVLPSDSEAADLKQEERLQELESCSGVGSTSDDTEVREVSS
RPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEDSAHGAHGLSCAP
SQADSLLAMFDPLSSGEGSSTGTIVRPKVHYPRPLHPPPDPPIPEASITGHQEPRPPLFA
PHLAQSDLEHPKQRHSYPERLVRSRSTDVVSAGRRPNSDPGLNRRTVMEEREPAGAYSTG
PTSSPSKDSLKGESEDRKDSDDEKSDRNRPWWKKRFVPAIPKVLYWTAEGELPVPIGGLR
KRDKLEKDEQGAERVQQGIPDEPSAFRQSSKTQSAEAIMDKYKYIMERRPTHSDGAVAGS
YVGQEPCREGDSEHDSPKDEALQNISADDLPDSASQTAPPQDKTFSFSDIKKKLRLALCS
ADSVVFPIIPPATTRNGLPDHADHEDNEIVCFLKVQLAEAINLQDKNQMAQIQETTRCVS
HLDPRTCRKLLTAMAEDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYF
TTVCVRLLLEHMESKMLDFIKAFQCCTAADDKTAAVEDFLRYLYGAMAHDAIWQYASEEQ
LQDAQMAIERSVMNRIFKLAFYPNQDGDIHRDELFHEHIQRLSKVVTANHKALQIPEVYL
KEAPWPSAQAEIRTINAYKTPRDKVQCILRMCSTIMNLLSLANEDAVPGADDFVPVLVFV
LIKANPPCLLSTIQYINNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacattcacactctggcccaccacctgaagcaggaacggctgtacgtg
gcatcagagaagcagctcatccagcggcttaacaacgaggtgctcaagacagcagagagg
ctgtaccgcacagcctggatcgccaaacagcaaaggatcaacctcgaccgcctcatcctc
accagtgcggaggcctctcctgcggaatgctgtcagcatgccaaggttctggaggacaca
cagtttgtggatggttataagacactgggctttcaggagagtatctacggggagttcttg
ggccgcttgagggagaacccacgattggtggcatcttgtctggtggcaggagaaagactc
aatcatgaacacacgcagggtgtcatccacacagtcttcacctccctctatggcaactgc
atcatgcaagaggatgaatgctacctgctgcaggtgctacgttatttggtggaatttgag
ctaaaggagagtgacaaccctcgtcgtatgttacggcgaggcacgtgtgccttcagcatc
ctcttcaaactcttctctgagggcctgtattcagctaagcttttcctcactgcaaccctc
cacgagcccatcatgcaattgctggtggaggacgaggaccatctagaaacagatccagcc
aaactgatagagcgctttaccccggcccagcaggagcgtctgtttggggagaaaggcaca
gatgagtaccgcaggaaagttcaggcagcagtggaggccaacgaggccaagctggtagcc
ctggtcaatacctttattggctacctgaagcagaacacctattgcttcccacagagcctg
cgctggattatgtctcagatgtataagacgctggcacgtgtggagaggttagaggtcggg
gaggtgaggacgatgtgcaccgacttgctgctcacctgcttcatctgtccagccatcgtc
aaccctgaacagtacggcatcatctcagatgcacccatcaatgaggtggcacgtttcaac
ctcatgcaggtggggcagttgttgcagcagttagccatgtctgatgcagatgatggagat
cctcgacgtaaaagcagcttatccaagtttgataagacgtgtgttgctgcctttttggat
gtcgtcatcggtggaagagctgtcgagactccgcctatgtcatcaatgaatttactggaa
ggcctcgcacggacggtggtttacatgactcataatcaacttttagctttggtggacttt
gtgcgtagtgtcactgcaggagatcagctcagagaagaagaccacctggctctggaaacc
ctactagccaatgtacctcagtcccgcacgacaaagagcaacagcctggagctcacgccc
tctaacacgccccagctctccccagctaccacacccgccaacaagaagaacagactccct
attggacaacagttggcagccataacatgttgggagccctctgccactgccctgtccgct
catatacccttagtaaccccatttgcaggctctcgcagccgaagccgatcgaacgtggct
caggagggtgagattgaagccagctcccaggagtctctgcaggaggtcacacctgaggac
gtgctagtcatctcgctgggaacctcactgcagaccgtacctgggatgatgtctgaaaac
gaggttctgactctgcatcttggagatggtggacaaggagatgcccctgttgatgacacc
aaactgcacgggaaacctgacaaaacgctgcgcttctcactctgcagtgacaacctggag
ggcatttctgaggggccgtctaaccgctccaattcagtttcttctttggacctggaggtg
gagtctgtgtcagaaggaggaccagggccgtctggtagcaatggtgcagaggccttgcag
ctactggaacatgaacaagccactacacaggataatttggatgataagctgcgtaagttt
gagattcgggacatgatgggactgacagatgacagggacatttctgagacagtcagtgag
acttggagcactgatgtcctgggcagtgactttgatcccaacatggatgaggaccgactg
caggagatggcaggggctgcggcggagaatgccttgggcagcctgctgtgtctgccagtg
cttctggacccgtacggttctaccatctctgagacaacgagcgaggcgtggagcgtggag
gttctgccgagtgactcagaagctgcagacctgaagcaggaggaacgattgcaggagctg
gagagctgctcgggtgtgggtagtacttcagacgacacagaggtcagagaggtcagctcc
agacccagcaccccgggactcagtgtcgtttcaggcatcagtgccacgtcagaggacatc
cccaataagattgaagacctacgctccgagtgcagctcagattttggaggcaaagactcc
gtgaccagtccagatggagaggactctgctcatggagctcacggtctgtcctgtgcaccc
tctcaagcagattcactgctggccatgttcgatcccctctcctctggagaaggttcttcc
actggcaccatcgtgaggcccaaggtacactatccccggccccttcaccctccccctgac
ccccccattccagaggccagcataacgggccaccaggagcctcgtccacccctcttcgcc
ccccacctggcgcagagtgacctggagcatcccaagcagaggcactcttaccctgaaagg
ctggtcaggagccgcagcacagatgtggtgtccgctggccgcagacccaacagtgatccc
ggactgaaccgcaggaccgtgatggaggagagagaaccggctggggcttattccacagga
cccacctcctctcccagcaaggattcactcaaaggagagtctgaggacagaaaggacagc
gatgatgagaagtctgataggaacagaccctggtggaagaagcgctttgttcctgccatt
cctaaagtgctctattggactgcagagggtgaactcccagtgccgatcggggggctgcgg
aagcgggacaagctggaaaaagatgagcaaggagcagagagagtacaacaaggtatacca
gatgagccttcagcattcaggcagagctctaagacccagtcagcagaggcaataatggac
aagtataagtacatcatggagaggcgacccacccacagtgatggggcagttgctggatct
tatgttggacaagagccttgtagagaaggagacagtgagcatgactcccctaaagacgaa
gccctgcagaacatctctgcagatgaccttccagactctgccagtcagacagcgccacct
caggacaagacattctccttcagtgacattaagaaaaagctacgcctggcgctgtgctct
gcagattcggttgtatttcctatcattccaccggcaacaacacgtaacggtctcccagac
catgcagatcatgaagacaacgagatcgtgtgctttctgaaggtgcagctggcggaggcc
attaacctgcaggataagaaccagatggctcagatccaggagactacgcgctgcgtcagc
cacctcgacccccgcacctgcagaaaactgctcactgccatggcagaggactacaggaaa
cgggctccgtacatcgcctatctgacgcggtgcaggcaaggcttgcagacgtctcaggct
catctagagcgactcctgcagagagtgttgagagataaagaagtggccaaccgctacttt
accaccgtctgtgtccgactgctcctggaacacatggagtcaaagatgcttgacttcatc
aaagcatttcagtgctgcacagcagctgatgataagacagcagccgtggaggatttcctg
cgttacctgtatggagccatggcccacgatgccatctggcagtacgccagtgaagagcag
ctccaggacgcccagatggccatcgaacgcagcgtcatgaaccgcatcttcaaactggca
ttctaccccaatcaggatggggacatccacagagacgagctattccatgagcacattcag
cgtctgtccaaagtggtgacggccaatcacaaagccctgcagatcccagaggtgtatctg
aaggaggcaccgtggccctcagcgcaggctgagatcaggaccatcaacgcctataagacc
ccacgagataaagtacagtgcatcctgcgcatgtgctccacaattatgaacctgctcagc
ctggccaatgaggacgctgtacccggggcggacgactttgtccctgtgctcgtctttgtg
ctgattaaagcaaacccaccctgccttctgtccaccattcagtacatcaataatttctac
gccagcaggttgagcggggaggagtgctattggtggatgcagttcactgctgccgtggaa
ttcattaaaaccatcgacgatcgcaagtga
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