Cyprinus carpio (common carp): 109082025
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Entry
109082025 CDS
T05134
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109082025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
109082025
Domain-containing proteins not elsewhere classified [BR:
ccar04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109082025
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
LIM_FHL2-3_N
Motif
Other DBs
NCBI-GeneID:
109082025
NCBI-ProteinID:
XP_042579106
Ensembl:
ENSCCRG00000051306
UniProt:
A0A9Q9W965
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Position
B5:32331439..32379848
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AA seq
559 aa
AA seq
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MSGKYSVVLQGPAPWGFRLQGGKDFNMPLSISRLSDGGKAAKAGVAVGDLVLSIDGISTD
GMNHLEAQNKIKSSTDKLNLSLQKASSRPKPDVAPKDDSVEIIKPFPMTTSIPSSSDITN
STHNTSSSNRSARPFGGAGSSHIASIPSAVSAFAPTSPAQNPNPQAPPTPTDGSPNHLPA
VPRPSVYNTPINLYSNENACEVAMGQRRGLLESQGESFQLNGKPAMNRLPRKPITETDIE
FYHVPTHGDASRKRIMEDTEDWRPRTGTSQSRSFRILAQITGTESEFDSSQEAESAKKTT
NEELDDSQPSAHVTCPVKTMVKTPGTPVRSTAGLITPTFGVMSNSTPLGPTLDRPRPRPH
PKDEASLVQMAEHIPAGTRTPVCAHCDMIIRGPFLMAMGKSWHPEEFTCAHCRVSLSELG
FVEEQGSVYCQHCYEEFFAPTCARCQYKILGEVINALKQTWHVYCFLCASCQKPIRNDTF
HLEDGEPFCERDYYSLFGTGCRGCDFPIEAGDKFLEALGGTWHDTCFVCSVCSASLEGQA
FFSKKDKPLCKKHAHTLKI
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtaaatacagtgtggtgttacagggtccggccccatggggcttcagactgcag
ggggggaaagacttcaacatgcctctctccatttcacggctgtcggatggaggaaaggct
gctaaagcaggagtggctgtgggagatctggtcctgtccatcgacggcatcagcactgat
ggcatgaaccacctcgaggctcagaataagatcaaatccagcacagacaaactcaacctc
tccttacagaaagcttccagtcgtccaaaaccagatgtggcaccaaaggatgattctgtg
gaaatcatcaaaccctttcccatgacaacctccattccatcttcctctgacatcacaaac
tccacccacaacacttcatcctccaataggagcgctcgcccgtttggaggggcagggtca
tcacacatagcctctattccgtccgccgtgtctgcttttgcacccacctccccagctcaa
aaccctaatccacaggctccgcccactcctactgatggctcacccaatcatctaccggcg
gtgccccgcccttcagtgtataacacacccatcaatctctactccaatgagaatgcctgt
gaggttgccatgggccagaggcggggcctgctggaaagccagggtgaaagctttcagctg
aatggaaaacctgcaatgaacagacttcctcgtaaacctatcacagagacagacattgag
ttttaccacgtcccgactcacggtgatgccagcaggaaacgcatcatggaggacacagag
gactggcgcccacggacaggaacttcacaatcccgctcgttccgtatcctggcccaaatc
accggcactgaatctgaattcgatagctcacaggaggctgaatcagcgaagaagacaaca
aatgaggagctggatgattctcagcccagcgctcatgtcacctgtcctgtaaagaccatg
gtcaaaaccccaggaacacctgtcagaagcacagcaggtctcatcactcccacttttggt
gtcatgagcaacagtactcctttagggcccaccttggaccggcccaggccccgcccacac
cccaaagacgaagcctcattggtccagatggcagaacacatccctgctggaacacgcact
cctgtgtgcgctcactgtgacatgattattagggggccgttcctgatggcgatggggaaa
tcgtggcacccggaggagttcacgtgcgctcactgcagggtgtctctgagcgagctgggt
tttgtggaggagcagggctctgtttactgccagcactgctacgaggagttcttcgccccg
acctgtgcacgctgccagtacaaaatcctgggggaagtgatcaatgcactcaagcaaacc
tggcatgtgtattgtttcctgtgtgcatcctgccagaaaccgataagaaacgatactttt
catcttgaggatggagagccgttctgcgagagagattactacagtctgtttgggacgggc
tgccgtggttgtgatttcccgatagaagcaggagacaagtttctagaggccctgggtggc
acttggcacgacacctgcttcgtgtgctcagtgtgcagcgccagtctggagggtcaggcc
ttcttctccaaaaaggacaaaccgctttgcaagaaacacgctcacactctcaaaatataa
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