Cyprinus carpio (common carp): 109082242
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Entry
109082242 CDS
T05134
Name
(RefSeq) transcription factor SOX-4-like
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109082242
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109082242
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
ETS_PEA3_N
Motif
Other DBs
NCBI-GeneID:
109082242
NCBI-ProteinID:
XP_018952681
Ensembl:
ENSCCRG00000026518
UniProt:
A0A8C1SRY0
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All DBs
Position
A19:complement(16508089..16510442)
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AA seq
358 aa
AA seq
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MGTDLAMVEQTRISNNGDVLPGDSTDSGEMDLDMDASPTPGSPNSTGDKMDIAWCKTPSG
HIKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGKRWKLLKDGDKIPFIREAERLRL
KHMADYPDYKYRPRKKVKSSSGKTGEKGERVIGSPGAKSASRKSSKTLSRTHRKSTALEL
TSHSVPADHHTLYKSRSAAKQIPEKPAKRGHVFGGCSSDSSPPSVAVPASPTLSSSAESS
DPLSLYEDGLASGKEDAESAARFKYTRAPSPTPSASHSSSSQSSSSDEEFEDELADPSPG
FDSFSTFGTAPLDRDLEFNFESGSGSHFEFPDYCTPEVSELISGDWLESTISNLVFTY
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgggcacagacttggctatggtggagcaaacgcgcatcagcaacaacggcgacgtgctc
cccggcgattccactgattctggggagatggacctagacatggacgcctccccgactccc
ggctctccaaactcaactggggataaaatggacatcgcctggtgcaaaaccccatcggga
cacatcaagaggccaatgaacgccttcatggtttggtcgcagatagagaggcgcaaaatt
atggaacagtcgccggacatgcacaacgcggagatctccaagagactcggcaagcgctgg
aaacttttgaaagacggcgacaagatccccttcatccgcgaggccgagcgtctgcggctc
aagcacatggcagactatccagactacaaatatcgaccacggaagaaggtgaagtcatcc
agcggcaagactggggagaagggggagcgcgtgatcggcagccccggcgcgaaatctgca
tccagaaagagctcgaaaactctcagcaggacgcacagaaagtccacggcgcttgagctg
acctcccactccgtccctgcagaccaccacactctctacaagtccaggtccgccgccaaa
cagatacccgagaaaccagcaaagcgcgggcatgtgttcgggggatgcagctccgatagc
agcccgccttccgtcgccgttccggccagtcctactctgagcagctcggcggaatccagc
gacccgctgagcctgtatgaggacgggctcgcgagcggaaaggaagacgcggagtccgcc
gcgcgcttcaagtacacccgcgcgccgtctccgacgccctctgcatcgcactcttcctcc
tcgcagtcgtcctcttcggatgaggagttcgaggacgagctggcggaccccagtcccggc
tttgacagcttcagcacctttggcaccgcgcctctagacagagatttggagttcaacttt
gagtcgggctccggctcgcactttgagttccccgactactgcaccccagaggtgagcgag
ctgatatcaggggactggctcgaatcgacaatatccaacttagtgttcacttattga
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