Cyprinus carpio (common carp): 109082378
Help
Entry
109082378 CDS
T05134
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109082378
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
109082378
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_9
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
109082378
NCBI-ProteinID:
XP_018952810
LinkDB
All DBs
Position
B25:6660853..6744896
Genome browser
AA seq
632 aa
AA seq
DB search
MRLCVIAAIQNDAVTGRMVAGEVSGHSFLVACWQPILILMLGTVLSGSATGCPSRCECNA
QERSVLCHRKKLMSVPEGIPSETRHLDLSKNRIKTINPDEFSAFPQLEELELNENTISTI
EPGAFNNLYGLQTLGLRSNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLR
SLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVMLRLRNLNINSI
RDYSFKRLYRLKVLEIANWPYLDTMTTNCLYGLNLTSLTITNANLTSIPYLALRHLVYLR
FLNMSYNPIQMIEGNRLHDLLRLQEFHLVGGRLTMIEPYSFRGLNYLKVLNVSSNSLSTL
EESVFHSVGNLETLALYDNPLACDCRLLWVFRRRWRLNFNRQQPTCSSPEFVQGKEFKDF
PDVLQPNYFTCRKSRIRDRKPQQKFVDEGTTVHFVCQADGDPTPVIMWLSPQKQFITTKT
IGRLTVFPDGTLEVRYAQIQDNGTYVCIASNAGGNDTALAHLHVHSYSPDWPNQPNKTLA
FISNQPNDNGANGTRATVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNSK
HNIEIEYVPRKSDAGMSSSGADAPRKFNMKMI
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctttgtgttattgcagcgatacagaatgatgctgtaaccggtaggatggtagca
ggggaagtgagtgggcacagcttcctggtggcatgctggcagcccattctaatcttaatg
ctgggcacagtgctgtctggctctgccacgggctgcccatcacgttgcgagtgcaatgct
caggagcgttctgtcttgtgccaccgcaagaagctgatgtccgttccagagggaatccca
tctgaaacacgacacctagacctcagcaagaatcgaatcaaaaccatcaacccagatgag
ttctctgccttcccgcagctggaagaactggagctcaatgaaaacactatctcaaccatt
gagccaggggcctttaacaatctctatggcctgcagactctgggactgcgcagtaacaag
ctgaagctcatccagctgggagtgttcacgggcctcagtaacctaacaaagctggacatc
agtgaaaataagatcgtaattctgctggactacatgttccaggacctctacaacttacgc
tctctggaggttggggataatgaccttgttttcatatcccacagggcgtttcacggcctc
agcagcctggagcagctcacgctcgaaaagtgcaacctgacctctgtcccgacagaagcc
ttcacgcacctgcacagcttggtcatgctgcgcttgcgaaacctcaacatcaacagcatc
agagactacagcttcaagcgactctaccgtctcaaagtgctggagatcgccaactggccc
tacctggataccatgaccaccaactgcttgtacggattgaatcttacctccctaacgatc
actaatgcaaacttgacatcaattccgtatttggccttgcggcacctggtttatcttcgt
ttccttaacatgtcctacaatcccatccagatgatcgaaggcaaccggctccatgacctg
ctcagactgcaagagttccacctggtgggcggtcgactgacaatgattgaaccctattcc
tttagaggactgaactacctaaaagtcctcaatgtgtccagcaactcccttagcaccctg
gaggagtctgtgttccattcggtggggaacctggagaccctcgcattgtacgacaacccg
ctggcttgtgactgccgtctgctttgggttttccgacgccgctggaggctcaacttcaac
cgccagcaaccgacttgctcctcacctgagttcgttcagggaaaagagttcaaggacttc
cctgacgtgctgcaacccaattacttcacgtgtcgcaagtctaggattcgagaccggaaa
ccccagcagaagttcgttgatgaaggcaccaccgtccactttgtctgccaagcagatgga
gacccgacacccgtcatcatgtggctttccccacaaaaacagttcatcaccacgaaaacg
ataggacggctcactgttttcccagatggcaccttggaggtgcgatacgctcagattcag
gacaatgggacatatgtgtgcattgctagcaatgctggtggaaatgacaccgctttggcc
cacctacacgtccacagttactcgccagactggcccaaccaacccaacaaaaccttggcg
tttatctccaaccaacccaatgacaatggagccaatgggacaagagcaacagtcccattc
ccatttgatataaagacgctaatcatcgccaccaccatgggcttcatctcctttttgggt
gtggttctgttctgccttgttctgctctttctttggagcagaggcaaaggcaacagcaaa
cacaacattgagatagagtatgtcccacgtaaatcagatgctgggatgagcagcagcggc
gccgatgcccctcggaaatttaacatgaaaatgatataa
DBGET
integrated database retrieval system
