Cyprinus carpio (common carp): 109082496
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Entry
109082496 CDS
T05134
Name
(RefSeq) HMG box transcription factor BBX-like isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109082496
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109082496
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
109082496
NCBI-ProteinID:
XP_042588594
UniProt:
A0A9R0A886
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Position
B10:complement(13942352..13973707)
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AA seq
907 aa
AA seq
DB search
MKGGGGGKEPPEEGEVSGKRPKRKCLQWHPLLAKKAPDFSEEEEEEDEEELEKEPVLCAE
SGAQEGECAGMEDDSEEYSSEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD
WWAVLDPKEKQKYTDMAKEYKDAFMKANPGYKWCPATNKPVKSPSHSVNNARKKVWSLPS
NPSKESSVAKKQSKTDSTPQLNFAMADPNKMGGLSMLLLAGEHALTAREISSSSSQTGCT
DVAKHTGKSALFQLAEISSSPVQPAGGSKNAEDTSSLTHVEASGPSQPSSPDLPKSCVKS
PLFQLAEQISSSRSQSGSEGRQCGQSALFQLAEMCLASEAEKMEARSSQPSGESSSLCAQ
HSSSSRVTAEHEDTPELPVTTSSSSSSSSSTSGSTSSSPTDTTPSDLSPCKTLKKKKKKK
ENKDSEENPTSPKKAKKRHSPESDLDSVMFTIEAVAKGAWGSEETPKKKARLSGSESSST
TDQSPAVKKKTKPKPKKQLKLKDDDAEEEEEGDEETNKLEDVEMKTEEAPLTPKDECENE
PDMKVEPPVGVEDTTPHCSPPHPTELEEKDTDTKQPQTRQEDREQEVKPETCGSRKSERT
CKGALYKTLVSEGMLTSLRANVDRGKRGSIRGSLSDHEGSWNDESWGFSQAATSNPKKLK
KSKSKEETTPGLGKLEEEFEKKFNSLPQYSPLTFDKKSVAVTKKKKNSTSSPPEPPKPCK
GSSSSQKKTLFHKIVNKYKHRKEKSSAADKDVVPTDPTVGTESSPVVKSGSPCVSPSPEP
QKVLDTPVGSQKRKARKSKITHLVRTADGRLSPAEAEDKSKDQTKNQDEKPFTQETLCNR
GVCYNDPRSAEVDVTDASGGLPAFFSLAALAEVAAMENVHRAQRAVSIPTEGQVKDMAPV
LISCADQ
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcggaggtggagggaaagaacctccggaggagggagaggtcagcggaaagcgg
cccaaacgcaagtgtctgcagtggcaccctctgctggccaagaaagctccggacttctct
gaggaagaggaggaggaggatgaagaggagctggagaaggagccggtgttatgtgcagag
agtggagcacaggagggagagtgtgccgggatggaagatgacagtgaggaatactcctct
gaacaacgggctcgccggcccatgaatgcttttctgttgttctgcaaacggcaccgttca
ctggtacgacaggagcatccgcgactagacaaccggggagccactaagatcctggcggac
tggtgggctgtactggaccccaaagaaaaacagaaatacacagacatggctaaggagtat
aaggatgcgttcatgaaggctaatcctggttacaaatggtgtcctgccaccaacaagcca
gtaaagagtccttctcactctgtgaataacgcccgcaagaaagtctggtctcttccatcc
aaccctagcaaggaatcttcagttgccaaaaaacagtctaaaactgacagcacaccccag
ctcaacttcgccatggctgatcccaataagatgggtggcttaagcatgctgctgttagca
ggggaacacgcactgaccgccagagagatttcctccagctcttcccagacaggatgcaca
gatgttgctaagcacactgggaaatcagcccttttccagctggctgagatttcttccagt
ccagtgcagccagctgggggaagtaagaacgctgaggacacaagctctctcacacatgta
gaggcctctggaccatctcagccaagttcaccagacctgcccaagagttgtgttaaatca
cccttgtttcagctggctgagcagatctcctccagtaggtctcagtcagggtctgagggg
aggcagtgcggccagtcggctcttttccagctcgctgagatgtgtttggcctctgaggct
gaaaagatggaagctcgatcctcccagccctctggtgaatcctcctcactctgtgctcag
cacagctcaagtagcagagtcaccgcagaacacgaagacactcctgaacttcctgtcacc
acttcatcatcatcatcctcatcatcctctacctccggatccacctcgtcctcccctact
gacaccaccccatctgatctcagcccgtgtaagacgctgaagaagaagaaaaagaagaaa
gaaaataaagactcagaagaaaatcctacatcgcccaaaaaggcgaagaagcgccattcg
cctgagtcggacctggacagtgtgatgttcaccatcgaagcagtagcaaaaggtgcttgg
ggctcggaagaaacacccaagaagaaagctcgtctctcaggtagtgagagcagctccaca
acggaccaatctccagccgtgaagaagaaaacaaaacctaaaccgaaaaaacagttgaag
ttaaaagacgatgacgcggaggaagaggaagaaggggatgaagagaccaataaactggag
gatgtagagatgaaaactgaggaagctcctctgacccctaaagatgagtgtgagaatgag
ccagacatgaaggtggagccccctgttggcgtggaggacacgacaccacactgctctcct
cctcatcctacagaactggaggagaaagacacagacaccaaacaacctcaaaccagacag
gaagatagagagcaagaggttaagccagagacctgtgggtccaggaagtcagagcgaacc
tgtaaaggagcgctttataagactcttgtgtccgaagggatgcttacatcactgagagca
aatgtggacagagggaaaagaggatccatccgaggaagtctgtccgatcatgagggcagc
tggaatgacgagagctggggattttctcaagctgcgaccagcaacccaaaaaagctcaag
aagtccaagtctaaagaggaaaccaccccaggactaggaaagcttgaagaggagttcgag
aaaaagttcaacagcttgccgcagtacagccccctgacttttgacaaaaagagtgtggcg
gtaaccaagaagaaaaaaaacagtacgtccagccctcctgaaccgcccaaaccctgcaag
ggttcatcttcatctcagaaaaagaccttattccacaagatagtgaacaagtacaaacac
aggaaggagaaatccagtgccgcagacaaagacgttgtcccaactgacccaactgtgggt
acagaatcaagtccagtggtgaagtcgggcagtccgtgtgtgtctccctctcctgaaccc
cagaaggttctggatacgcctgtgggcagtcagaagaggaaggccaggaagagtaaaatc
acacacttagtgcgcacggctgatggccgattgtcacctgcagaggcagaagacaaatcc
aaggatcagaccaagaatcaggatgaaaagccattcactcaagagacattatgcaatagg
ggggtctgctacaatgaccccagatcagcggaagtggacgtgacggatgcatccgggggc
cttccggctttcttcagcttggctgctctggctgaggttgcagccatggagaatgtgcac
agagcccagcgtgctgtgagcatccccactgaaggtcaagtgaaggacatggctcctgtg
ctgatttcctgtgcggaccagtga
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