Cyprinus carpio (common carp): 109082504
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Entry
109082504 CDS
T05134
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04142
Lysosome biogenesis
ccar04144
Endocytosis
ccar05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109082504 (cltca)
04142 Lysosome biogenesis
109082504 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109082504 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109082504 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109082504 (cltca)
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
109082504 (cltca)
Exosome [BR:
ccar04147
]
Exosomal proteins
Proteins found in most exosomes
109082504 (cltca)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
Gp18_dom_I
Ig_TRAPPC10_3rd
Motif
Other DBs
NCBI-GeneID:
109082504
NCBI-ProteinID:
XP_042588578
Ensembl:
ENSCCRG00000038053
LinkDB
All DBs
Position
B10
Genome browser
AA seq
1689 aa
AA seq
DB search
MPEVKMSPTLNPPPLLLSEPISNLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVV
IIDMADPNTPIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTDDVTF
WKWISLNTIALVTDNAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGI
SAQQNRVVGAMQLYSVERKVSQPIEGHAAGFGQFKMEGNAEESTLFCFAVRGQAGGKLHI
IEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETG
TCIYMNRISGETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIQYITNVLQNPDLALR
MAVRNNLAGAEELFGRKFNTLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQGVPAQPGQ
TSPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAV
DPTLALSVYLRANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRISPDQGL
QFAQMLVQDEEPLADITQIVDVFMEYNLVQQCTSFLLDALKNNRPSEGPLQTRLLEMNLM
HAPQVADAILGNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEW
LVNFFGALSVEDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQALTELFESFKSFEG
LFYFLGSIVNFSQDTEVHFKYIQAACRTGQIKEVERICRESNCYDPERVKNFLKEAKLTD
QLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIK
NLILVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNHP
ERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRR
RDPDLWASVLLETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEK
IVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISSELFEEAFA
IFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKESIDSYIK
ADDPSAYMEVVQVSSQSGNWEDLVKFLQMARKKSRESYVETELIFALAKTNRLAELEEFI
NGPNNAHIQQVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANST
RTWKEVCFACVDGNEFRLAQICGLHIVVHADELEELINYYQDRGYFEELITLLEAALGLE
RAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEE
YDNAIITMMSHPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRL
DHSRAVSFFSKVKQLPLIKPYLRSVQNHNNKSVNEALNNLFISEEDYQALRTSIDAYDNF
DNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDIELA
EELLQWFLQEDKKECFAAGLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMREYLSKV
DKLETSESLRKEEEQATETQPIVYGTPQLMLTAGPSVPVPPQQAYGYGYTAAPGYPQAPQ
AQPGFGYGM
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagtcaagatgtctcctacactaaatcctcctcctctgctcctctctgaaccc
atttcaaatctccaaaatttggggatcaacccagccaacatcgggttcagcaccttgacg
atggagtctgataagttcatctgtatccgggagaaggtcggagaacaggcacaggtggtg
atcatcgacatggcagacccaaacacccccatccgcaggcccatctctgcagatagcgcc
atcatgaaccctgcgagcaaagtcattgcacttaaagacgctgccaaaacccttcagatc
tttaacatcgagatgaagagtaagatgaaagcccacactatgactgatgatgtcactttc
tggaagtggatctctcttaacaccattgccctggtgaccgataacgccgtctatcattgg
agcatggagggagactctcagccagtcaaagtgttcgacagacattccagcctggcaggc
tgtcaaatcatcaactaccgcactgatgccaagcagaagtggctgctgcttattggcatt
tctgctcagcaaaaccgagttgttggtgccatgcagctctactcagttgaaaggaaggtg
tcacagcctatcgagggtcatgccgctggctttggacagttcaaaatggagggaaatgca
gaagaatccactctcttctgtttcgctgtacgaggtcaggcaggaggaaagcttcacatt
attgaagtggggacgccaccaaccggcaaccagccattcccaaagaaagctgtggatgtg
ttcttccctccagaagcacagaatgacttccccgttgccatgcagatcagctccaaacag
gacgtcgtatttctcatcactaaatacggttacattcatctgtatgacctggagacgggc
acctgcatctacatgaacagaatcagtggagagaccatttttgtgactgcaccccacgaa
gccacatctggaatcattggcgtgaacaggaaaggacaggtgttgtcagtgtgtgttgag
gaggagaacatcatccagtacatcaccaatgtgctgcagaatccagacctggctttacga
atggcggtccgaaataatctggcaggagccgaggagctgtttggccgtaagtttaacacc
ctctttgccgcaggaaactactccgaggcagctaaagtggccgctaatgctccaaagggt
atcctgcgcactccggacaccatccgtcggttccagggcgtcccggctcagcccggtcag
acatccccactgttgcagtatttcgggatcctgctggaccaaggccagctcaacaagttt
gagtctctggagctgtgcagaccagtccttcagcagggccgcaaacagcttctggagaaa
tggctgaaggaggacaagcttgaatgctcagaggagttgggcgacttggtgaaggctgtg
gaccccactcttgctcttagtgtctacctgagggccaacgtacccaacaaagtcattcag
tgtttcgcagaaaccggccagttccccaagattgtcctgtatgccaaaaaggtgggctac
actccagactggatctttctgctgaggaacgtgatgcggatcagtccggatcagggtctg
cagtttgctcagatgctcgttcaggatgaagaaccgctggctgacatcacacagatcgtt
gatgtgtttatggagtataacctggttcagcagtgcacgtccttccttttggatgctctg
aaaaacaaccgcccatcagaaggtccactgcagacccgtctgctggaaatgaacctgatg
catgcaccacaggttgcagatgccattctaggaaatcagatgttcactaactacgatcgt
gcccacattgcccaactgtgtgagaaggcagggcttctgcagagagctttagagcactat
actgacctgtacgacatcaaacgagctgtcgtacacacacacctgctcaacccggagtgg
ctggtgaacttttttggcgctctgtcagtggaggactctctggagtgtctaagagccatg
ctgtccgctaacatcaggcagaaccttcagatctgtgtccaggtggcctccaagtatcac
gaacagctgactacccaggcactcactgagcttttcgagtctttcaagagttttgagggt
ctgttctacttccttggctcgattgtgaacttcagccaggacacagaggtgcatttcaaa
tacatccaggccgcatgcaggacgggccaaatcaaagaggtggagcggatctgtcgggaa
agcaactgctatgaccctgaacgtgtcaagaactttctcaaggaagctaaactcaccgac
cagctgcctctcattattgtgtgcgatcgcttcgacttcgtccatgatcttgtactctac
ttgtaccgaaacaacctgcagaagtacattgaaatctacgtgcaaaaggtgaacccaagt
cgtctgcctgtggttattggagggctcctggatgttgactgctccgaggacgtcatcaaa
aacttgattttggttgtgcggggccagttttccaccgatgagctggtggcagaagtggag
aagagaaacagactgaagctgttgttgccatggctggagtctcgtatccatgagggctgt
gaggagccagctacccacaatgccttggccaagatctacattgacagcaataatcaccca
gaacgcttcctgcgggaaaacccgtactacgacagccgtgtggtagggaaatactgtgag
aaaagagaccctcacctggcctgtgtggcctatgagagaggacagtgtgaccaggagctc
atcaacgtgtgcaatgaaaactcgctgttcaagagtttgtcccgttacctggtgcgccgc
agagacccagatctttgggccagcgtgcttttggagaccaaccccttcaggaggcccctt
attgaccaggtggtgcagacagccctgtcagagactcaggacccagaggaggtgtccgtc
acagtgaaggccttcatgactgctgacctgcccaatgaactcattgagctgctggaaaag
atcgtcctggacaactcagtctttagtgaacacagaaacctgcagaacctgctcatccta
acagccatcaaagcagaccgcacacgcgtcatggaatacatcaaccgcctggacaactac
gatgccccagacatcgccaacatcgccatcagcagcgagctgttcgaggaggcctttgct
atcttcaggaagtttgatgtcaatacctctgcagtgcaggttctgattgagcacattggt
aatctggaccgggcttatgagtttgcggagcgctgtaatgaacctgcagtgtggagccag
ctggctaaggctcaactgcaaaagggtctcgtcaaagagtccattgactcctacatcaag
gctgatgacccctcagcttacatggaggtggttcaggtctcttcccagagtggtaactgg
gaggacctggtgaagtttctgcagatggccagaaagaagtccagagagtcctatgtggag
acagagctgatcttcgcactggccaaaaccaaccgtctcgctgaactggaggagtttata
aatggaccaaataatgcacacatccagcaggttggagatcgctgctatgacgagaagatg
tacgaggcggccaaacttctgtacaataacgtctccaacttcggccgcttggcttctacc
ctggtccacttgggagagtatcaagccgcagtggacggtgcccgcaaggctaacagcact
cgcacatggaaggaggtgtgctttgcttgtgtggatgggaatgagttcagattggctcag
atctgcggccttcacatcgtggttcatgccgatgaactagaagagctcatcaactattac
caggaccgtggctacttcgaggagctgatcaccttgctggaggcggcgctggggttggag
cgcgctcacatgggcatgttcacagagctggccatcctctactctaaattcaaaccacag
aagatgagggaacacctggaactgttctggtccagagtcaacatcccaaaggtcctgagg
gctgcagagcaggctcacctgtgggcagagcttgttttcctctatgacaagtatgaagaa
tatgacaacgccatcatcaccatgatgagccatcccacagatgcctggaaagagggacag
ttcaaagacatcatcaccaaggtggccaacgtggaactgtactacaaagcaatccagttt
tatctggagttcaagcccttgttactgaacgacctgctcatagttctttccccgagactg
gatcactctcgtgccgtcagcttcttcagcaaggttaagcagcttcctctcatcaagcct
tatctgcggtcagtacaaaaccacaacaacaagtctgtcaatgaagcacttaacaacctc
ttcatctcagaggaagactatcaggcactcaggacatctatagatgcgtacgataacttc
gacaacatctcactggcccagcgtctggagaaacacgaactgatcgagttcaggagaatc
gctgcttacctcttcaagggaaacaaccgatggaagcagagtgtggagctgtgcaagaaa
gacaaactctacaaggatgcaatgcagtatgcgtcagagtcgaaggacatagaactggcc
gaggagctgctgcagtggttccttcaggaagataaaaaggagtgttttgccgccggcctt
ttcacctgctatgacctgctcaggcctgatgtggtgctggagacagcatggaggcacaac
atcatggactttgccatgccttacttcatccaggtgatgagggaatacctcagcaaggtg
gacaagctggagacctccgaatccttgaggaaagaagaggagcaggcgacagagactcaa
cccattgtttatggcacacctcagctcatgctgacagcaggtcccagtgtgcctgtcccc
ccgcagcaggcttatggctacgggtacacagcagcccctggctacccccaggctcctcag
gcacagccgggtttcggttacggcatgtaa
DBGET
integrated database retrieval system
