Cyprinus carpio (common carp): 109082563
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Entry
109082563 CDS
T05134
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 1-like
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccar04040
]
109082563
Ion channels [BR:
ccar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109082563
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
109082563
NCBI-ProteinID:
XP_042570017
UniProt:
A0A9Q9VRT9
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Position
A24:5938221..5958426
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AA seq
799 aa
AA seq
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MHISALPYSLSVIMAALYQGTDSSSPDKYLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKRLLEEKRHGELNINCVDVLGRDAVTISIENENLDILQLLLDHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLMQRIQNPGRVFPTTMDVAPVILLPHRNNYEILTMLLK
QDISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFEL
STDLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSEDHIDKRGL
LEERMNLSRLKLAIRYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKILYVLSVTLM
WPLLSICYLLGPRSRVGQVIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEGKKNTMGPPL
ELIDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHSKF
KNVGEEARKNWDAFHPLLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFG
KFLGLFLLVLISFTIGLTQLYGKDEDLSSSKNITKNCEGIFCREQSNDTFHTFMGTCYAL
FWYIFSLAHVALFVTRISYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIAN
HEDKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLVISLSKWICSHTSTGKVKRQ
NSLKEWRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNE
MRDLLGFRTSKYAMFYPRS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgctttgccgtactctctctccgttataatggctgctctatatcagggc
acggactcgtcttctccggataaatatctggcgttaaaagacgtcagagaggtgaaggag
gagaccactctggacgagaagctctttctgctggcctgcgagaagggagactactacatg
gtgaagagacttctggaggagaaacgacatggtgaattaaacattaactgtgtagatgta
cttgggagagatgctgtcaccatttcaatcgaaaatgagaatctagatatattgcagttg
ctcttggatcatggctgtcaggccacagatgcattattagtggctattgattcagaagtg
gtaggagcagttgacatcctgctaaaccatcggcccaggcgttcctccaagccttctatt
gcgaaattgatgcagcgcattcaaaacccagggagggtattccccaccaccatggatgtt
gctccagtcattctgctgccccaccggaacaattatgagattttgacaatgctattaaag
caagacatctctctgccccgaccccatgctgtagggtgcgagtgcaccctctgtaatgcc
aagaacaagaaggacagtctccgtcactcaaggttccgtctagatatctaccggtgcctc
gccagcccatccttgatcatgcttactgaagaagaccccattctgagagcattcgagctc
agcactgatctgaaagagctgagcctggtggaagtggagtttcggaatgattatgaagaa
cttgccaagcagtgcaagatgtttgccaaggaccttctggctcaggcccgcaactctcgt
gagctggaggtcatactgaaccacacgtccagtgaggaccacatagacaagagaggcctg
ctggaggaacgcatgaacctcagtcgcctcaaactggccataagatacaaccaaaaggag
tttgttgcccagtccaattgtcagcagttcctgaatacggtgtggttcggcgagatggca
agctaccgccgcaagcacacatgcttaaagatcctgtatgttttgagtgtgacgctgatg
tggcctctgctgtccatctgttacctgctgggcccccgttctcgagtgggccaggtcatc
cacacaccttttgtcaagttcatcatccatagtgcctcttacttcaccttcctgctcctt
ctaaacctctactcactggtctacaatgagggtaagaagaacaccatgggcccccctttg
gagttgatagactaccttctcattctctggatcataggcatggtgtggtctgatgtgaag
cgtctatggtatgaaggattggaggacttcctggaagagtcacggaaccagctgagtttt
gtcatgaactcgctttatttggccacttttgccctaaaagtggtggctcacagcaagttt
aagaacgttggggaagaggcaaggaaaaactgggatgcattccatccactcttggttgct
gaaggcctttttgcgttcgccaatgttttgagctatctccgtctcttcttcatgtacacc
accagctccatcttggggcctttacagatctccatgggccagatgctacaagagtttggg
aagtttcttggcttattcctgctcgtactcatctctttcaccattggcctgacacaactg
tatggaaaagacgaggacctctccagctccaaaaatataaccaagaactgcgagggcatc
ttctgtcgagagcagagcaacgacacctttcacacgtttatggggacatgttacgccctc
ttctggtacattttttccctggcacatgtggctctgtttgttacaaggatcagctacaca
gaggagctgcggtcgtttgttggtgctctcatcgtcggtacctacaacattgttgtggtc
attgttctcactaaactcctggtggccatgctgcataagagcttcagacagattgctaac
cacgaagataaggagtggaagtttgccagggccaagctgtggctcagctactttgatgat
aagtgcacactgcctccacctttcaacatcctcccctcgcccaagaccgtgtgctacctg
gtcatcagcctgagcaaatggatctgttcccacacttctacaggcaaggtcaagagacag
aatagcctcaaggaatggagaaacctgaagcagaaaagagatgagaactaccagaagatt
atgtgctgtcttgttcaccgttacctgacctccacaaggcagaagatgcagagcacggac
caggccacggtagagaacctcaatgatctgcggcaagacctctccaagtttcgcaatgaa
atgagggaccttttgggcttccgcacttccaaatatgccatgttttaccccagaagctaa
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