Cyprinus carpio (common carp): 109082876
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Entry
109082876 CDS
T05134
Symbol
sox19a
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ccar
Cyprinus carpio (common carp)
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccar03000
]
109082876 (sox19a)
Transcription factors [BR:
ccar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
109082876 (sox19a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
109082876
NCBI-ProteinID:
XP_018953270
Ensembl:
ENSCCRG00000001248
UniProt:
A0A8C0Y2L1
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All DBs
Position
B5:complement(5279657..5281967)
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AA seq
296 aa
AA seq
DB search
MYSMLEHDMKSAVPPTHQSAQGMTQLNGGVTHGAAKQAVNNQQQSSDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPDYK
YKPRRKTKPMLKKDNPAAKYPLSAGNLLAAAAAQGSGGSPRMDSYGWGHTGGYTGMQTDA
LGYSQQLHRYDLSALQYPSAMATAQSYMNSANNYNPMSYSSTPQQPSPVMSMVKPDQVSH
SPTGAHSHQRGPLQGDLRDMISMYIPGGDTTDSGAQRGYSNIQQHYLTGTAPLTHI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggaacacgatatgaaatccgccgttccaccgacgcaccaaagcgcg
cagggaatgacccagctgaacggtggagtgacgcacggagccgccaaacaggctgtcaac
aaccaacaacagagtagcgatcctatggacaaagttaagaggcccatgaacgcgttcatg
gtctggtctcggggtcagaggcgcaaaatggcacaggagaaccctaaaatgcacaactct
gagatcagcaagcgcctgggcgcagagtggaagctgctgacggacgcggagaaacgtccg
tttattgacgaggccaagcggctccgcgcactgcacatgaaggaatacccagattacaaa
tacaagccccgacgcaagacgaaacccatgctgaagaaggacaacccggctgctaagtat
cccctatcagccggcaacttactggcggcagccgcggctcaaggatcaggtggaagcccg
cggatggacagctatggctggggtcacacaggtggctacactggcatgcagacggatgct
ctgggctacagtcagcagctgcaccgctacgatctgtctgccctccagtatccatctgcc
atggccaccgcacagtcttatatgaacagtgccaacaactacaaccctatgtcctacagc
agcactccccagcagcccagcccggtcatgtccatggtgaaaccagaccaggtgtctcac
tctcccaccggagcccacagccaccagcggggtcctttacaaggagacctgagggacatg
attagcatgtatatcccgggtggagacaccacagacagtggagcacagaggggctattcc
aacatccaacagcattacctcaccggtacagcacctctcactcacatctga
DBGET
integrated database retrieval system
