Cyprinus carpio (common carp): 109082920
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Entry
109082920 CDS
T05134
Name
(RefSeq) RNA-binding protein Musashi homolog 1-like
KO
K14411
RNA-binding protein Musashi
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109082920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccar03019
]
109082920
Messenger RNA biogenesis [BR:
ccar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109082920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
109082920
NCBI-ProteinID:
XP_042618496
Ensembl:
ENSCCRG00000030648
UniProt:
A0A8C1W3T3
LinkDB
All DBs
Position
A8:17630196..17651368
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AA seq
372 aa
AA seq
DB search
MPIPLSTLSASFLAPYSDGIHSRAMESEGSQSNLSSDSPHDPCKMFIGGLSWQTTQEGLK
DYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKVLAQSRHELDSKTIDPKVAFP
RRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTF
ENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMSPTGSSRGRARVMPYGMDAFMLGIGML
GYPGFQAATYASRSYTSLTPGYTYQFPEFHLERTPLLTSPHPSELTAIPLTAYNPMAAAA
AAAAVVRGSTPSRSAGFLGTSSPGPMADLYGTANQDSAISSYISAASPAPSTGFSHSLGG
PLIATAFTNGYH
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgccaatccccctctccacactttctgcctcctttctcgcaccgtactcggacgggata
cacagccgcgcaatggagtcggaaggcagccaaagtaacctgtcctcggactctccgcac
gacccctgcaaaatgttcatcggtggtctgagctggcagactacgcaagagggtttgaag
gactacttctgcaagtttggtgaagtgaaagagagtatggtgatgagagatccagttaca
aaacgctcgaggggtttcggatttgtcacatttgttgaccaagctggtgtggacaaagtc
ctggcccagtccagacatgagctggactcgaaaactattgacccgaaagttgccttcccg
cgacgagcccagcctaagttggtgactcggacaaagaaaatctttgttggaggtctgtcg
gtgaacactactattgaagatgtaaagcagtactttgaccagtttggaaaggtggatgac
gccatgcttatgtttgacaaaaccaccaacaggcacagaggttttggatttgtgaccttt
gagaatgaagatgtggtggaaaaagtctgtgagatccacttccacgaaatcaacaacaag
atggtggagtgtaagaaagcccagcccaaggaagtgatgtcacccacaggctcttcaaga
ggtcgcgcgcgtgtcatgccctatgggatggacgccttcatgcttggcataggaatgctg
ggttatccagggttccaggcagcaacatatgcaagtcgcagctatactagtctgacccca
ggatacacatatcagttccctgaattccacttagagaggaccccccttctgacatcaccc
cacccctctgagctcacagccattcctctaacggcgtacaaccccatggcggcagccgca
gcagcagcagctgtggtcagagggtcaactccttctcgctcagctgggtttttaggtacc
agcagccctgggccaatggcagacctgtatggaacagccaatcaggactcggccatcagt
agttatatcagcgctgcaagtccggctcccagcactggattcagccacagccttgggggc
cctctgattgctacagcatttacaaatggctatcattga
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