Cyprinus carpio (common carp): 109082991
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Entry
109082991 CDS
T05134
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109082991 (lrrc4ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109082991 (lrrc4ca)
Cell adhesion molecules [BR:
ccar04515
]
Immunoglobulin superfamily
NGL family
109082991 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
LRR_9
Ig_2
LRRNT
DUF7617
Ig_6
Sp38
Syndecan
DUF6821
Motif
Other DBs
NCBI-GeneID:
109082991
NCBI-ProteinID:
XP_042609497
Ensembl:
ENSCCRG00000034184
UniProt:
A0A9R0AV13
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All DBs
Position
B25:complement(7961857..8174736)
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AA seq
647 aa
AA seq
DB search
MINKMTSSLMQQTMRGPRWNRALSDPLFVLSLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLANLNTLELFENRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVRLDELEMSGNQLSIIRPGSF
KGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPASHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRANSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETTEAAHDEGQPTVQQKSGPT
PSSGIWETLPPSFTTTTTTARTPLSTKATDKTYTIPVTALIDGSLNTLDEVMKTTKIIIG
CFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINMDEDCVTGGPTIEGHLTLPPL
EHEHLNHYNAYKTVYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaagatgacctcctccctgatgcagcagacgatgagaggtcctaggtggaac
cgggccctgtccgacccattgtttgtgctgtcgctggccctgcagcttctggtggtggct
ggcttggtgcgagcgcagacctgcccctctgtctgctcttgtagcaaccagttcagcaag
gtcatctgtacgcgacgtggccttcgagatgtacccgatggtatttccaccaacacaagg
tacctgaaccttcaggagaacctcatccaggtgatcaaggttgacagcttcaagcatcta
aggcacctggagatcctgcagctcagcaagaaccacatccgcaacattgaaatcggagct
ttcaatgggctggccaacctcaacactctagagctcttcgaaaatcgtctaaccacaatc
cccaatggggctttcgagtacctgtccaaacttaaagagctttggttgaggaataaccct
atcgagagtataccctcttatgccttcaaccgtgtaccatcgctgcgaaggctggacttg
ggtgagcttaaaaggctctcatatatctcagaaggtgcctttgaaggcctcagcaacctg
cggtacctgaacctgggcatgtgcaacttaaaggagatccccaacctcattcctcttgtc
cgtttggatgagttggagatgtcagggaaccagctgtctataataaggccagggtctttc
aaagggctcgtccacttacagaaactgtggatgatgcatgcgcagatccagacgattgag
agaaatgccttcgatgatcttcagtccctcgtggagctcaatttggcccacaataacctt
accctcctgcctcatgaccttttcaccccactacaccacttggagagggtacacttgcac
cacaacccctggaactgcaactgtgacatcctctggcttagttggtggctaaaggaaatg
gtgccggccaataccagttgctgtgcccgctgttcgtcccctgccagccacaaagggcgc
tacatcggtgaactcgaccagaactatttccattgttatgcaccggtgatcgtggagcca
ccagcggacctgaatgtgactgagggcatggcagcagaactgaaatgtcgagcaaattct
ttgacctcagtcagctggatcacgcccaatgggtccatcatgacgcacggggcatacaag
gtgcgcatttctgtgctcaacgatggaacgctgaactttaccaatgtcacaatgcaggac
acgggaacgtacacttgtatggtgagcaactccgcaggcaacacgacagcctcagctaca
ctcaatgtgtcctcgacagagaacagcagcttcagttacttcactacagttaccgtcgag
accacagaagcagcacatgatgagggccagccaacggtacagcagaagagcggccctact
ccttcttctgggatttgggagaccttaccaccttcctttaccactacgaccacgacagca
cggacaccactgtccaccaaggccaccgacaagacctacaccatcccagtcacagccctg
attgatggctccctcaacactttggatgaggtcatgaagaccacaaagatcatcattggt
tgctttgtggccatcaccctgatggcagccgtcatgctgatcatattttataaaatgcgc
aaacagcatcaccagcagaaccaccacgcaccgacgcgaacaatcgagatcatcaacatg
gacgaggattgtgtaacgggtggacctaccatagagggccacctcactctccccccactg
gagcatgagcacctgaatcattacaacgcctacaagactgtgtacaaccatgcctccacc
atcaattctatacacagctctgcccacgaacctttgctaattcgggccagctcaaaagac
aatgtacaagaaacccagatctga
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integrated database retrieval system
