Cyprinus carpio (common carp): 109083441
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Entry
109083441 CDS
T05134
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar03040
Spliceosome
ccar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109083441
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
109083441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccar03041
]
109083441
Spliceosome [BR:
ccar03041
]
Common components
Common spliceosomal components
SR proteins
109083441
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
109083441
NCBI-ProteinID:
XP_042607121
UniProt:
A0A9Q9XTP4
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All DBs
Position
B23:complement(2939995..2944535)
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AA seq
381 aa
AA seq
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MPRVYIGRLSYHVREKDIQRFFGGYGKLLEVDLKNGYGFVEFEDTRDADDAVYELNGKEL
CGERVMVEHARGPRRDRDSYGGGGYYGGGGGGGGGGGGGRSGYSSRSRPGRDKYGPPVRT
EYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDMRRAVEKLDG
TDINGRKIRLVEDKQRRRRSYSGSRSRSRSRRRSRSRSRRSSHSWSNSRSRSRSRSRRQR
SRSRSGHRSRSKSPSSKSRSRNRKSRSRSRTHKSRSRSTSRKSRSRSDERKSRSKSTSKV
KSDRGRSKEKSVSRKSRSRSASPMENGDGGRAKSASRSPSPQAEKSQCKSPDRRSRSRSK
SGSRSKSRSRSRSRSRSVSQD
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgagtgtacatcggccggctgagctatcatgtccgcgagaaagacatccagcgc
ttcttcggaggctacgggaagctgctggaggtggatctgaaaaacgggtacggctttgtt
gagtttgaggacacccgtgatgctgatgacgccgtctatgagctgaacggtaaagagctg
tgtggagagcgggtcatggtggagcacgccaggggtccgcgccgggaccgggacagctat
ggaggagggggttattatggtggaggaggaggaggtggtggtggtggaggaggaggacgc
agtggttacagcagcagaagccgccccggaagggacaagtatggccctcctgttcgcaca
gagtaccgcctcattgtggagaatctgtctagtcgctgcagttggcaagacctcaaggat
ttcatgcgacaggcaggtgaggtgacctacgcagatgcccataaggagcgtgccaatgag
ggcgtgattgagttccgctcctactctgacatgcggagagctgtggagaaactggatgga
acagacatcaatggcaggaagattcgtctggttgaagacaagcagcggcggcggcgctcc
tactctggcagccgctctcgttctcgtagccggcgtcgttctcgtagtaggagtcgccgt
agcagccattcttggagcaactcgagatctcgctcaaggtctcgctctcgccggcaacgc
tcccgttccaggtcaggacacaggtctcgttccaaatctccatcgagcaagtctcgctcg
cgcaaccgtaaatcccgttctcgctcccgcacacacaaatctcgcagtcgatcaaccagt
cgcaagtctcgctcccgctcagatgagcgcaagtcccgctctaagagcacttctaaagtg
aagtcggatcgtgggcgctccaaggagaaatcagtcagcaggaaatccagaagtagatct
gcttcaccgatggagaatggcgacgggggtcgtgccaagtctgcttctcgctctccatca
cctcaggctgagaagagccagtgcaagtctccggacaggcgctctcgctctcgctctaag
tctggctcacgctctaaatcccgctcccgctcccgttcccgttccagatctgtgtcccaa
gattag
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