Cyprinus carpio (common carp): 109083645
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Entry
109083645 CDS
T05134
Symbol
igsf5a
Name
(RefSeq) immunoglobulin superfamily member 5
KO
K06786
junctional adhesion molecule 4
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04517
IgSF CAM signaling
ccar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109083645 (igsf5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109083645 (igsf5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ccar04515
]
109083645 (igsf5a)
Cell adhesion molecules [BR:
ccar04515
]
Immunoglobulin superfamily
CTX family
109083645 (igsf5a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
C2-set_3
I-set
C2-set_2
SCY_4732_
ig
Membra_charge
Cathelicidins
YqfB
PepSY_TM
DUF8777
Motif
Other DBs
NCBI-GeneID:
109083645
NCBI-ProteinID:
XP_042588951
Ensembl:
ENSCCRG00000036108
LinkDB
All DBs
Position
B10:complement(18371084..18380144)
Genome browser
AA seq
325 aa
AA seq
DB search
MNVFRLGLFLLITTVVSAQVPLQPLNAAVLRGSKARFNCSTTQPPSVMTWTVNGRLVITI
LEASGVLNSTDRFSATNFTTPGDYRWELVISNVQINYTVKHTNQSMPQDPKLSNCSFPER
GSVEIIGGNQTKTEGAQTEFQCRALGWFPEPSMSWSVNGVANSCNTSSVTQGNLFNSNCT
LTVTAVKNSYVQCLVKIPALSTPDSSTVFLTVEKLAKIDQTVLIAVTVAFSAAALLFLII
YGIVFFCKRRKKKSSYQEEIRRARIQSQNRTPATENVRGRDNRGYRDRHDGHTNGGVWYT
NHSNKHQMPDGFFDGHRNHTHMTTV
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttttagactgggtctttttcttctgatcaccacggtggtgtccgctcaggtg
ccgctacagcctctgaatgcagcggtgctccgtggttcgaaggctcggttcaactgcagc
acaactcagcccccatccgtcatgacctggacggtcaacggacgcttggttatcaccatt
ctggaagcatctggggtgttgaacagcacagatcgtttttctgccacgaatttcaccacg
cctggagattacagatgggagcttgtaattagcaacgtacagataaactatacagttaaa
cacaccaaccaatccatgccacaagacccaaaactttccaactgttcttttccagaacgt
ggcagtgtggagatcataggtggaaatcagaccaaaacagaaggagctcagacagagttc
cagtgcagggccttgggctggtttcctgaaccaagcatgtcctggtctgttaatggagtg
gcaaattcctgcaacacaagctctgtaacacagggaaacctgttcaactccaactgcacg
ctgacagtcactgctgtcaaaaactcttatgttcagtgtctggtcaagataccagccctg
agcacaccggacagcagcacggtcttcctgaccgttgaaaagcttgctaaaatagaccaa
acggtgttgatcgctgtcactgtggccttcagcgctgcggctctgttgtttctaatcatc
tacggaattgttttcttctgcaaaaggaggaagaaaaagtcaagctaccaagaggagatc
aggagggcacgaatccagtcccagaataggacgcctgccacagaaaatgtgcgaggacgg
gacaaccgaggatatagagacaggcatgatggacacaccaatggtggagtctggtacaca
aaccactctaacaaacatcagatgcctgatggcttttttgatggtcacaggaaccacaca
cacatgaccaccgtctag
DBGET
integrated database retrieval system
