Cyprinus carpio (common carp): 109083877
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Entry
109083877 CDS
T05134
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04142
Lysosome
ccar04144
Endocytosis
ccar05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109083877
04142 Lysosome
109083877
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109083877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109083877
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109083877
Membrane trafficking [BR:
ccar04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
109083877
Exosome [BR:
ccar04147
]
Exosomal proteins
Proteins found in most exosomes
109083877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
109083877
NCBI-ProteinID:
XP_042595248
Ensembl:
ENSCCRG00000045999
UniProt:
A0A9Q9X4U3
LinkDB
All DBs
Position
B15:13244212..13272594
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTEDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPSG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKHDVVFLITKYGYIHLYDLEMGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNNLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGALS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPDRVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKDPELWASV
LLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VGQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMM
NHPSDAWKESQFKDIITKVANVELYYKATQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFF
SKVKQLSLVKPYLRSVQNHNNKAVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQSL
ERHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQ
EDKKECFAACLFTCYDLLRPDVVLETAWRHNLMDFSMPYFIQVMREYLSKVDAIKEKVDK
LDASESLRKEEEQLTEAQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYPTATGYGQPAQPG
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcctatccgcttccaggagcatctgcagctccaaaacctgggcata
aacccagcgaacattgggtttagcaccctcacgatggagtcggataagttcatctgcatc
cgggagaaggtgggcgaacaggcccaggtggtgatcatcgacatgagcgatccaaatacg
cccatccgcaggcccatctctgcagacagtgccatcatgaacccagccagcaaagtcatt
gctcttaaagacgcggcaaaaacccttcagattttcaacattgaaatgaagagcaagatg
aaggcccacaccatgaccgaggacgttacattttggaagtggatctctctcaataccgta
gcacttgtgacagacaatgcggtctatcactggagtatggaaggagactcgcagcccatc
aaagtctttgaccggcattccagtttagcaggctgtcaaattattaactaccgcactgac
gccaaacagaaatggctgcttctgattggaatttctgcacagcaaaaccgcgttgtgggt
gcaatgcagctttactcagtggatagaaaggtgtcacagccgatcgaaggccatgctgct
ggatttgctcagtttaaaatggagggaaatgctgaggaatccacacttttctgctttgct
gttcggggacaagctggaggaaagttgcacattattgaggttggaacacctccgtcaggt
aatcaaccttttccaaagaaagcagtcgacgtgtttttccctccagaggcacagaacgat
tttccggtcgcaatgcagataagctccaagcatgatgttgtctttctcatcaccaaatac
ggctacatccacctgtatgaccttgagatgggcacctgcatctacatgaacaggatcagt
ggagagaccatttttgtcaccgctcctcatgaagccacatctggcattattggcgtgaac
cggaagggacaggtgctttctgtgtgcgtggaggaagaaaacatcatcccttacataact
aacgtgctgcagaaccctgatctggcccttaggatggccgtccgcaacaacttggcaggt
gcagaggagctcttcgcccgcaaattcaacaacctatttgctggtggcaactactctgaa
gctgccaaagtggctgccaatgcaccaaagggcatcctgcgcaccccagacaccatccgt
cggttccagagtgttcctgcccagcccggtcagacgtctcccctgctgcagtactttggg
attctgctggatcagggccagctgaacaagtttgagtcattggagctttgtaggcccgtc
ctgcagcaaggccgcaaacagctcctggagaaatggctaaaggaagacaagctggagtgc
tctgaagagttgggtgatctggtgaagtctgtggatccaactcttgcacttagtgtttat
ctaagggccaacgttcccaacaaagtgatccagtgtttcgcagagaccgggcagttccag
aaaattgtactgtatgcaaaaaaggttggctacactccagactggatcttcctgttgagg
aacgtcatgcggatcagtccagaacaaggcctgcagttctcccaaatgctcgttcaggat
gaggaacctctggctgacatcactcagattgtggatgtgtttatggagtataacctgatc
cagcagtgcacttctttcctgttggatgccctgaagaacaaccgccccactgaaggtcct
ttgcagactcgtctgttggagatgaacttgatgcatgccccacaggtggcagatgccatc
ctggggaaccagatgttcactcactatgacagggcccatgtggctcagctgtgtgagaag
gcaggtcttctacagagagctctggagcactacactgacctgtatgacatcaaacgggcc
gtggtccacacccatctgctcaatccagagtggctggtgaacttcttcggtgctctgtcg
gtggaggactctctggagtgtctgagagccatgctttctgctaacatcaggcagaacctc
cagatctgcgtccaggtggcctccaagtatcatgagcagctctccacccagtcgctcaca
gagctctttgagtccttcaagagctttgagggtctgttctacttcctgggctccattgtg
aacttcagccaggatcctgaggttcacttcaaatatatccaggctgcttgtaaaactggt
caaatcaaagaagtggagagaatctgcagagagagcaactgttacgatcctgatcgtgta
aagaatttcctcaaggaagcaaaactgaccgaccagctgcccctcatcattgtgtgtgac
cgctttgactttgtccatgaccttgtgctctacttgtaccgcaacaacctgcagaagtac
atcgagatctatgttcagaaggtgaaccctagccgtttacccgtggtgattggagggctg
ctggacgtggactgctctgaggacgtcattaagaacctcattctggtggtcagaggccag
ttctctactgatgagcttgtggccgaggtggagaaaagaaacagactgaagcttcttctg
ccgtggttggaggcccgtatccatgagggctgtgaggaacctgctacccataatgccctg
gctaagatctacatcgacagcaacaacaaccctgagcgcttcctccgagagaacccctac
tatgacagccgtgtggtgggcaagtactgcgagaagagggacccccatctggcctgcgtg
gcttatgagagaggacagtgtgaccaagagctcatccatgtttgcaatgagaactcgctc
ttcaagagtctgtcccgataccttgtgcgtcgtaaggaccctgagctatgggctagtgtg
cttctggaaagcaacccttacaggaggcccctaatcgaccaggttgttcaaactgccctt
tctgagacccaggaccctgaggaagtgtctgttactgtcaaagctttcatgactgctgac
ctacccaatgaactcattgaacttttggagaagattgttttggacaactccgttttcagc
gaacaccggaacctgcagaacctcctgatcctgacggccatcaaagctgaccgcactcgt
gtcatggagtacatcaaccgcctcgacaactatgacgccccagacatcgctaacatcgcc
attagcaatgagctcttcgaggaggcttttgcgatcttcaggaagtttgatgtgaacaca
tcagcagtgcaggttcttatcgagcacattggaaatctggaccgggcctatgagtttgct
gagcgctgtaatgagccggccgtgtggagtcagctggctaaagcacagctacagaaggga
ctggtgaaagaggccattgactcttacatcaaagctgacgacccctcggcctacatggaa
gtgggacaagctgcagcccaaagcggaaactgggaggatctggtcaagtttctgcagatg
gctcgtaagaaggcccgtgaatcgtatgtagagacagagctgatctttgccctggccaag
actaaccgtctggctgaactggaggagtttatcaatgggccaaacaacgcacacattcaa
caagttggtgacagatgctatgatgagaagatgtacgaggcagctaaactactttataac
aatgtatccaactttggccgtctggcctccactctggtgcatcttggcgagtatcaggct
gctgtcgatggggcccgcaaagccaacagcacaaggacctggaaagaggtttgctttgcc
tgtgttgatgggaaggagtttcgtctggctcagatgtgtggattgcatattgtcgttcat
gctgatgaacttgaggagctcatcaactactaccaggaccgtggttatttcgaggagttg
atcaccatgctggaggcggcgctggggctggagcgcgctcacatgggcatgttcacagaa
ctggccatcctctactccaaattcaaaccacagaagatgagggagcacctggagctcttc
tggtccagagtcaacattcccaaggttttgagggcagcagagcaggctcatctgtgggga
gagctagtcttcctgtatgataagtatgaggagtatgacaacgccatcatcaccatgatg
aaccatccttcagatgcctggaaggagagccagttcaaggacatcataaccaaggttgct
aacgttgagctgtattacaaagccacccagttctacctggagttcaaaccgctgctactg
aatgacctgttgatcgtactgtccccgcgtctcgaccacactcgtgccgtcaacttcttc
agcaaggtcaaacaattatcgttggtgaaaccatacctgagatctgtacagaaccacaac
aacaaggctgtgaatgaggcactaaataatctcttcatcacggaggaggattatcaggct
ctgcgcacatccatcgatgcctacgataacttcgataacatatctctggctcagagcctg
gagaggcacgaactcatcgagttcaggcgaatcgctgcctacctgttcaaaggcaacaac
cgctggaagcagagcgtggagctctgcaagaaagacaaactttacaaggacgcaatgcag
tatgcttcagagtcaaaggacacagagctggctgaggagctgctgcagtggttcttgcag
gaagacaagaaagagtgttttgctgcctgcctgttcacctgctacgacctgctgaggccc
gacgtggtgctggagaccgcgtggaggcacaacctcatggacttctccatgccctacttc
atccaggtcatgagggaatacctcagcaaggttgatgcgattaaggaaaaggttgacaag
ttggatgcttcagagtctttgaggaaagaggaagaacagctcacagaggcacaacccatt
gtctatggcacaccccagctgatgctcactgcaggccccaacgtcgcagttcccccacag
cagccttacggctacggttaccccacggcgactggctatggccaacccgcacagccaggc
ttcggctacggcatgtaa
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integrated database retrieval system
