Cyprinus carpio (common carp): 109083949
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Entry
109083949 CDS
T05134
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109083949
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccar02000
]
109083949
Transporters [BR:
ccar02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109083949
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
109083949
NCBI-ProteinID:
XP_042582479
UniProt:
A0A9Q9WFJ8
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Position
B6
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AA seq
609 aa
AA seq
DB search
MDPSNGLNRPLEIVPHTEVKMKDRGQWSNKLEFVLSVAGEIIGLGNVWRFPYLCYKNGGG
AFFIPYLIFLFTCGIPVFFLEISLGQFTSEGGITCWRKISPLFEGIGYATQVIVALLNFY
YIIVLAWGIFYLSFSFSWNLPWASCNNTWNTDACVEFQRRNESNDQSYLENATSPVIEFW
ERRVLRISSGIEEIGTLHWDLVLCLLLAWVLCYFCIWKGVKSTGKVVYFTATFPYVMLLI
LLIRGVTLPGASRGIQFYLYPDLGRLADPQVWMDAGTQIFFSYAICLGCLTALGSYNKYN
NNCYRDSLALCFLNSGTSFVAGFAIFSILGFMSYEQNVPISEVAESGPGLAFIAYPRAVS
MMPISPLWACFFFIMIVLLGLDSQFVCVESLVTAMVDMYPTFFRQKNRRELLILAVAVVS
FLVGLIMLTEGGMYVFQLFDYYAASGMCLLFVAIFETICIAWIYGANRFYDNIEDMIGYR
PGPYIKYCWLFFTPATCFGTFAFSLIKYTPLKYNNEYVYPWWGYALGWLLALSSMVCIPL
WVVSKLSMAKGSLKERFHELIRPSPDLPKTRLEQEKLQAIFAADGDTLRQRGGPTKDGYF
PVSEKESHC
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggacccgtctaatgggctgaaccggccgctggagatcgtcccgcacacggaggtgaag
atgaaggacagaggacagtggagcaacaagctggagttcgtcctgtcggtggccggagag
atcattgggctgggaaacgtgtggcgcttcccgtatctctgctacaagaacggtggaggt
gcatttttcatcccttacctgatcttcctcttcacctgtggtattcccgtgtttttcctg
gagatttctctgggtcagttcaccagcgagggaggaatcacgtgctggaggaagatcagc
ccgctgtttgaaggtatcggttacgccactcaggtcatcgtggctctgctcaacttctac
tatataatagttctggcctggggaatattttacctgtccttctccttctcctggaacctg
ccgtgggcctcctgcaacaacacctggaacacagatgcctgcgtggaattccaaagacga
aatgaatccaatgaccaaagttaccttgaaaacgcaacatcgcctgtaattgagttttgg
gaacgcagagttttgcggatctcgtctgggattgaggagataggaacgctgcactgggat
ctggtcctctgtctgttgctggcctgggttctctgctatttctgcatctggaaaggcgtc
aaatccaccggcaaggtggtgtacttcactgcgaccttcccgtatgtgatgctgttgatt
ttactgatcagaggggtcacgctgcccggagcgtcccgtgggatccagttctatctttat
cctgatttgggacggttagcggacccgcaggtgtggatggacgcaggcacgcagatcttt
ttctcgtatgccatatgtttaggttgcctcactgcactcggaagctacaataaatacaac
aacaactgctacagggattctttggccctgtgtttcctgaacagtggaaccagcttcgtt
gctggttttgccatcttctcgattctcggcttcatgtcttatgaacagaacgtcccaatt
tcagaagtggctgagtctggtcctggtttggcgttcattgcctatccgcgggcagtgtcc
atgatgcccatctctccgctgtgggcctgtttctttttcatcatgattgtactgctgggg
ctggacagccagttcgtgtgtgtggagagtctggtcacggctatggtggacatgtacccc
accttcttccggcagaagaaccgcagagagctgctcatcctcgccgtggccgtcgtctcc
ttcctcgtgggtctcattatgctcacagagggtggaatgtatgtcttccagctgtttgat
tactacgcagccagtgggatgtgtttgctattcgtagctatttttgagaccatctgcatc
gcttggatatacggtgctaatcggttttatgacaatattgaggacatgattggttaccgt
cctgggccgtatattaaatactgctggctcttcttcaccccagccacatgttttggtacg
tttgcgttctccctgatcaaatacactcctctgaagtataataatgagtatgtgtacccg
tggtggggttacgctctcggctggctgctggcgctctcctctatggtttgcatcccgctg
tgggttgtttctaaactgagcatggccaaaggttcactgaaagagcgttttcacgagctc
atcaggccctcaccggacctccccaaaaccagactggagcaggagaaacttcaggccatc
tttgcagccgacggcgacactcttcgccagcgaggcggtccgaccaaagacgggtacttc
cctgtcagcgagaaggagtcgcactgttag
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