Cyprinus carpio (common carp): 109084171
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Entry
109084171 CDS
T05134
Name
(RefSeq) vacuolar protein-sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109084171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109084171
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccar04147
]
109084171
Membrane trafficking [BR:
ccar04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
109084171
Exosome [BR:
ccar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109084171
Exosomal proteins of colorectal cancer cells
109084171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
DUF1351
MA3
Motif
Other DBs
NCBI-GeneID:
109084171
NCBI-ProteinID:
XP_042620988
Ensembl:
ENSCCRG00000051492
UniProt:
A0A9Q9YIS0
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All DBs
Position
A10:9007318..9016753
Genome browser
AA seq
382 aa
AA seq
DB search
MDRFVWTNGLLEMNETLVIQQRGVRLYDGDDKAKLDVGVVLLSTHRLLWRDQKNHECCIC
IPLSQVIFFEEQAAGIGKSAKIVIYLHPVPENKEPGPYQQSKYSFIKLSFKEHGQIEFYR
RLTEEMTQKRWENTPVSQPIPTGTTPKAARTRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVEVSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTQ
YHIQLARQLGDILQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKVGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacaggtttgtttggacaaatgggctacttgagatgaacgaaaccttagtaattcag
caaagaggagtgagactttacgatggggacgacaaggctaaacttgatgtgggggttgtt
cttctcagtacccatcgccttctctggagggaccagaagaatcatgaatgctgtatatgc
atacccttgtcacaggttatattctttgaggaacaagcagcaggcatcggaaagagtgcc
aagattgtcatttacctgcatcctgtcccggaaaataaggagccaggcccctaccagcag
agcaagtattcctttataaagctgtccttcaaagaacatgggcagattgagttttacaga
cgtctaactgaagagatgactcagaaacgatgggagaatacacctgtctcacaacccatc
cccacaggaacaacacccaaggccgcaagaacacgcgcagtggggattgtgggtattgaa
cggaagctggaagagaaaagaaaagagacggataaaaacatttctgaggcctttgaggat
ctcagtaaactgatggaaaaggccaaagagatggtggaggtctccaaatccattgccaac
aaaatcaaagacaaacagggtgacatcacagaagatgagactatccgcttcaagtcttat
ttgctgagtatgggtatagcgaacccagtgaccagagagacacacggctcaggcacacaa
taccacatccaactcgccaggcagctgggagacatactgcaggccccactggaggagcgt
ggaggaatgatggccctcactgaagtgtactgtttggtgaacagagcccgtggaatggag
cttctctctccggaggacttagtcaatgcctgcaagatgtttgaatcactgaagcttcct
ctacggttgcgagtatttgacagcggcgttatggtggttcagctccagtcccacagtgaa
gaggaaatgattgcctcagctctagataacgtgtctgataaaggctccctcacagccgaa
gagtttgccaagttgttgggactgtcagttctgctttctaaagaaagattgttattagct
gaaaaagtgggtcacttgtgccgagacgattcagtagaaggtctgcgcttttatcccaac
ctgttctga
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integrated database retrieval system
