Cyprinus carpio (common carp): 109084459
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Entry
109084459 CDS
T05134
Symbol
arhgef12b
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
ccar
Cyprinus carpio (common carp)
Pathway
ccar04270
Vascular smooth muscle contraction
ccar04625
C-type lectin receptor signaling pathway
ccar04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccar00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109084459 (arhgef12b)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109084459 (arhgef12b)
09153 Circulatory system
04270 Vascular smooth muscle contraction
109084459 (arhgef12b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccar04131
]
109084459 (arhgef12b)
Membrane trafficking [BR:
ccar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109084459 (arhgef12b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
APAF1_C
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
109084459
NCBI-ProteinID:
XP_042612899
Ensembl:
ENSCCRG00000040890
LinkDB
All DBs
Position
A5:33345398..33416620
Genome browser
AA seq
1447 aa
AA seq
DB search
MFCLFSLCLFLDGVHKCDLLTGSILSKDHPPDKKPKSDKASIPSSHEFDPTELPVQSVVA
DRRPESCGLVQRCVIIQRDENGFGLTVSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHVEVVKLIKSGSYVALTVLGRPPGLPQIPLSDGEGEEGPLFSLTFPHSPGPIG
PDRSSSSPSPPERKPTPLPVWAMTEEHSRNPTTKLLKEIQDAKKHIPQHQEQLSKPTGTG
QDGSLSPRPREGEQEDGGGDLDRPSSWQGDAGMEPPWTNNTTTPVTPSPVPESPCQRETP
SHSPKTTPRDSLNSCPSPDAEDTPDLDSQSSVGSPSSRPVAHIIGAEDEDFDTEQEQMNG
QCSCFQSIDLLKSRPAHLAAFIHHVVSQFDPAPLLCYLYAELYKQTSSKETRRILMDTFF
IDKTASLKVTVPESIIADLERTAHSINAERKRPEPNSEDVHRQYVQQLQDTLLPDIQKNL
EDFKHKRSMGLTLAEAELARLDTERMRDRVALEKERSCAEHIISKIEDVLLTSQATEEDK
CSTMQFVILSYMKQLGVKVKHKPKLMNLFPKKKMKGIKPEKDGSEEKSKKTRFPSVFPQR
RPSRIDPSSLSKALEPRQRPTKPQLPLGAGEQADGSSPPVRGSQSSEGSDGTTALVTLPP
YSAPPAQGTDCISRESETGGPPFSAVPRLGDGVVPGDSQDSSSSNTHFDFSPCTLEHLQE
EEAETEKAQDTGTPRSDKSRMEPLGSGEVQSEDDQCVEVELEPPNWQTLVSRDVLSTLTP
QEIKRQEVINELFYTERAHVRMMKVLENVFYQPLIREAILPPADIKNIFSNLEEIVQLHV
SLTEQMTAVRKKNETALIDSIGDDLLSWFSGEEEAKIKRAAGTYCSNQPFALELIKSKQK
KDQRFSSFIQEAESNRHCRRLQLKDIIPVETQRLTKYPLLLENLAKYTEDPEERGKVKQA
GECCRNILTHVNQEVKEAENKQRLEDYQRRLDLSSLKQSENPMIAEFKNLDLTKRKMVHE
GPLSWKVNKDKTIELYTLLLEDILVLLQRQDEKLILKCHSKNLAGTAETKHIFSPIIKLS
TVMVRSVATDNKSFFVLSMSDNGAQIYELMAQTVSEQKTWQCLITHRADCMKTKLHNIFP
LPQTDGEREAVELMNSGVQKLNKDSEPISLVSIQSPEKDCTEVMPTPPCSTNPFETKSDE
EDEEEENTLQDQAEDDDTFVAADMTDRLTFLKQRSRLGIAIDEDEAEAFELQPLRADEAL
RTLATLRQLLINHMSSQEDTDRDGERREQQEDVARTGSHQGSEDSTAISSTVENGSDRGE
NRGENAQELPSGDTGFFETSEDCVSAGSYMVLEVCGGSGESSTDDDVQGSSGEPVAGGDS
GIDLKKLLSSSSQSSGGPNLNRRIMTHIRLLQANLQHLKDTEIKYNQLRQRLSEETATDT
EENKDKS
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgttttgtctgttctctctgtgcctgtttttagacggggtgcacaagtgtgaccttttg
acaggaagtattctcagcaaggaccatcccccagacaaaaagcccaaaagcgacaaggcg
tcaatcccctcctcacatgagtttgaccccacagaactgcctgttcaaagtgtagtagcc
gacagaaggccagagtcctgcgggcttgtgcagcgttgtgttatcatccagagagatgag
aatggctttgggctgacagtgagcggcgataaccctgtgtttgtacagcttgtaaaagag
gatggagctgccatgcgagctggtgttcagacaggtgaccggatcataaaggtcaatggg
acattagttacacattcaaatcatgtagaagttgtcaagctaataaaatcgggctcctac
gtggccctaacagtgctggggagaccgccgggtttgcctcagatccccctctcagacggc
gagggggaggaggggcctctcttctcgctcaccttccctcactccccggggcctatcggt
ccagaccgctcatcttcctcccccagccccccggagcgcaaaccgacccctcttcctgta
tgggccatgacggaggagcacagcaggaaccctacaactaaactactgaaggaaatccag
gacgccaagaagcacattccacagcaccaggagcagctcagcaagcccactgggactgga
caggatggctccttatcgccaaggccacgagaaggagagcaggaggatggagggggagat
ttggatcggccctcttcctggcagggtgatgctggaatggagccaccgtggaccaacaat
accacaactcctgttactcccagtcctgtcccagagagcccatgccaaagagagaccccg
tcccacagcccaaagaccacaccccgagacagcctcaactcctgtccttcaccggacgct
gaagacacacctgaccttgattctcagtcgagtgtggggagcccctcctctcgtccggta
gcacacatcattggtgctgaggatgaagactttgacacagagcaggaacagatgaatggc
cagtgtagctgttttcagagcatagaccttctgaagtctcggcctgctcacctggcagct
ttcattcatcacgtggtctctcagtttgaccctgcgccgctgctgtgctacctctatgct
gaactttacaaacagaccagctccaaagagacacgacgaatactcatggatactttcttc
atagacaaaacagctagcttgaaagtgacagtgcccgaatccatcatcgctgacctggaa
cgtactgcacactcaattaatgcagaacggaagaggccggagcccaactcagaggacgtc
caccgacagtatgtgcagcagctgcaggacacacttctgcctgacatccagaagaaccta
gaagacttcaagcacaagcgcagtatgggtttgaccctggctgaagcggagctagcccgt
ctggatacagagagaatgagagaccgtgtggctcttgaaaaagagcgatcctgtgcagag
cacatcatctctaagatagaagatgtactattgacgtcacaggccacagaggaagacaag
tgtagcaccatgcagtttgtgatactgtcgtatatgaagcagctcggtgtaaaagtgaag
cacaagcccaagctaatgaatcttttccctaagaaaaaaatgaaaggtataaagccagag
aaagatggaagtgaggagaaatcgaagaaaacaagatttccgagtgtttttcctcagaga
cggccgagcaggattgacccttcatcactcagcaaggctctggagccgaggcagcgtccg
accaagcctcagctgccattgggcgctggagagcaggcagacgggtcgtctcctcccgta
cggggcagtcagtccagtgagggctcagatggcaccactgccctggtcacattgccccct
tacagtgctccaccagcacagggcacagactgcatcagccgagagtcggagactggtgga
cctcccttttctgcagttcccaggctgggtgacggtgttgtcccgggagattcgcaggac
tcgtcctcttcaaacactcactttgacttcagcccctgtacactggagcatctacaggag
gaggaagctgagacagaaaaggcgcaggacaccggcacccccaggtctgacaagagcagg
atggagccgctgggctctggagaggtgcagagtgaagatgatcagtgtgttgaggtggag
ctagagcctcctaactggcagacgctggtgagcagagacgtcctgtccacacttacccct
caggaaatcaagagacaggaagtcatcaacgagttgttctacacagagagagcacacgtt
cgaatgatgaaggttctggaaaatgtgttttaccagccgctgatcagagaggccatcctg
cctcctgcagacatcaaaaacatcttcagcaaccttgaggagatcgttcagctgcatgtg
tctttaacggaacaaatgactgcagttcggaagaaaaatgagactgcgctcattgactca
attggagacgatctgctttcctggttcagtggggaagaggaggcaaagatcaagagagct
gcaggcacgtactgcagtaatcagcctttcgccctggaactcatcaagagcaaacagaag
aaagaccagcgcttcagctccttcatacaggaggcggagagtaaccgtcattgtcggagg
ctgcagctgaaggatattattcctgttgagactcaaagactcacaaagtatcccctcctg
ctggagaacctcgccaaatacacggaggatcctgaagagagaggtaaagtgaaacaggct
ggcgaatgctgtcgaaatattctcactcacgtcaaccaggaagtgaaggaagccgagaac
aaacagaggttggaggactaccagagacgactggacctgtcctcactgaaacagagcgag
aaccccatgatcgccgagtttaagaacctggacttgactaagaggaagatggtgcatgag
ggaccgctgtcctggaaggtcaacaaagataaaactattgagctgtacacattgctgctg
gaggatatattggtgctacttcaaaggcaagatgagaagctaatcttaaaatgccacagt
aagaatctggcgggcactgctgagaccaaacacatcttcagccctatcatcaaactcagc
actgtgatggtgcgctccgtcgccaccgacaacaagtcattctttgtgctctctatgtct
gataatggagcccagatctatgaactaatggcccagaccgtatctgagcaaaagacgtgg
cagtgtctgataacacacagagcagactgcatgaagaccaaactacacaacatctttcca
ttacctcagacagatggggaacgtgaagcggtcgagttgatgaactctggtgttcagaaa
ctaaacaaagactcggagcccatttctttagtgagcattcagtctccagaaaaagattgc
actgaggtcatgccaaccccgccatgtagcaccaacccatttgagaccaaatctgatgag
gaggatgaagaagaagaaaatacactacaggatcaagctgaggatgatgacacgttcgtg
gcggccgatatgaccgatcgactgacattcctgaagcagcgctcgaggctgggcatcgcc
atagacgaggacgaggctgaggcctttgagctccagccactcagagccgatgaagctctc
agaacactggcaacactgaggcagctcctgatcaaccacatgtccagtcaggaggacaca
gacagagatggcgaaagacgagagcaacaggaagatgtggcgaggacgggctctcatcag
gggtcagaggacagcactgcgatcagctccactgttgagaacggctcagacaggggcgag
aacagaggggagaacgcacaggaactgccctccggagacacaggcttctttgagacatct
gaggattgtgtctcagcaggcagttacatggtgctggaggtgtgtggcggctcaggggag
agcagcacagatgatgacgtgcagggcagcagcggggagccagtggccgggggagactca
ggcattgacttgaagaagctcctgtcgtcctcctctcagagcagcggaggaccaaacctc
aacagacggatcatgacacacatacgtctactacaggccaacctgcagcatctgaaggat
acagaaatcaagtataatcagctacgccaaaggctatcagaggaaacagctactgacaca
gaggaaaacaaagataaaagttag
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integrated database retrieval system
